Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0087 |
Symbol | |
ID | 4783873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 83755 |
End bp | 84468 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640088634 |
Product | hypothetical protein |
Protein accession | YP_001019284 |
Protein GI | 124265280 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.518244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGATCT GTCGTGTGCG CGGACTGAAC GCCGCCCTGA TGCTCGGCGT GCTGGGGTCG CTGGCGGTGG ACGCCTCGTC GCAGGAGGTC AAGCAGGGCA GCGCCATCTA CACCTGCACC AATGCCGCCG GCCGCACCCT CACGCGCGAC CGCCCGATCG CCGAATGCAT GGACCGCGAG CAGCGCGTGC TCAACAGCGA TGGTTCGCTG CGCACCGTGC TGCAACCCAG TCTCACGTCC GATGAGCGCG CGGCGCATGA GGAGGCCGAG CGCCGCAAGG CGCAGGAGCG CGCGAACAAG CAGGAGGCGA TCCGCCGCGA TCGCAACCTG CTGGCGCGCT TTCCGAACGA GGCCGCGCAC AACAAGGCCC GAGATGCCGC GCTGAACGCC ACGCGCAGCG GCATCCAGGC CTCGGAGCAG CGTTTGGCCG ACCTGCAGAA GGAGCGCAAG CCGCTGCTCG ACGAGGCCGA GTTCTACAAG GGCAAAAACC TACCGGGCAA GCTCAAGGGG CAGATCGAGT CGGTGGACGT GAGCATCGAG GCGCAGCGCG CGCTGATCGT CAACCAGCAG GCCGAGGTCG GTCGCATCAC GGCGCTGTTC GACGCCGAAC TGGCCCGGCT CAAGCGGCTG TGGGGTGGCG CCGATCCGGG ATCGCTCGGC CCGCTGCCGC AGTCGGCGCT GGCCGGTCAG GCCGCGCCGC CACCCAAGCC TTGA
|
Protein sequence | MRICRVRGLN AALMLGVLGS LAVDASSQEV KQGSAIYTCT NAAGRTLTRD RPIAECMDRE QRVLNSDGSL RTVLQPSLTS DERAAHEEAE RRKAQERANK QEAIRRDRNL LARFPNEAAH NKARDAALNA TRSGIQASEQ RLADLQKERK PLLDEAEFYK GKNLPGKLKG QIESVDVSIE AQRALIVNQQ AEVGRITALF DAELARLKRL WGGADPGSLG PLPQSALAGQ AAPPPKP
|
| |