Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0085 |
Symbol | gatA |
ID | 4783871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 80781 |
End bp | 82271 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640088632 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_001019282 |
Protein GI | 124265278 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.43524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCG AGCTGCACCA GCTCGGCGTG GCCGACCTGT CGGCCCGTCT GGCCGCCAAG ACGGTATCGA CTGCCGAAGT CACGTCACAC CTGCTTGCGC GCGTTGCTGC CCATGAACAC CTGGGGGCCT TCCTGTGCAC CGATGTCGAA CTGGCGCTGC AGCAGGCCCG CGCGGCCGAC GAGCGGCGCG CCCGTGGCGA GACCCTCGGC GCGCTCGACG GCGTGCCGCT GGCCCACAAG GACATCTTCG TCACGACCGA CTTTCCCAGC ACCGCGGCCT CGAAGATGCT GGCCGGTTAC CGCTCGCCCT TCGATGCAAC GGTCGTCGCG AAGCTCAAGG CGGCCGGCAC CGTGACCTTG GGCAAGCTCA ACTGCGACGA GTTCGCGATG GGCGGCAGCA ACGAGAACTC GGCCATCCGG CCGGTCCGCA ACCCCTGGGA CGCGGAGCGC ATCCCGGGCG GGTCGTCGGG TGGCTCGGCG GTGGCGGTGG CGGCGCGGCT GGTGCCGGCC ACCACCGGCA CCGACACCGG CGGCTCGGTG CGCCAGCCGG CCTCGCTGTC CGGCGTGACC GGCATCAAGC CGACCTACGG GCGCTGCTCG CGCTACGGGA TGATCGCCTT CGCCTCCAGC CTCGACCAGG CAGGCCCGAT CGCCAAGAGC GCCGAGGACT GCGCGCTGCT GCTGGGCGCG ATGAGCGGCT TCGACGAGCG CGACGCCACC TCGGCGCAGC AGCCGGTGCC CGACTTCGCC GCGCTGCTGC GTGCCCCGCG CGACGGTGCA AGCGCCGGCC GGCCGTTGCA CGGCCTGCGC ATCGGTCTGC CGCGGGAGTT CTTCGGTGCC GGCGTGGCCG GCGACGTGAC GCAGGCGGTA CGTGCTGCAC TGGCCGAGGT CGAGAAGCTC GGCGCCACGT TGGTCGACGT GAGCCTGCCG CGCACCGAGC TGTCGATCCC GGTCTACTAC ATCATCGCCC CCGCCGAGGC GAGCTCCAAC CTGGGCCGCT TCGACGGCGT GCGCTACGGG CACCGCGCCG CGCAGTACGG TGACCTGCTC GACATGTACC GCAAGAGCCG CAGCGAAGGC TTCGGGGCCG AGGTCAAGCG CCGCATCATG ATCGGCACCT ACGTGCTGAG CCACGGCTAC TACGACGCCT ACTACCTGCA GGCGCAGAAG CTGCGCCGCA TGATCGCCGA CGACTTCCAG GCGGCCTTCG CCCACTGCGA CCTGATCGCC GGTCCGGTGG CGCCGACCGT CGCGCGCCGG CTGGGTTCGC AGACCGACCC GGTGGCCGAG TACCTGGCCG ACATCTTCAC GCTGCCGGCC AGCCTGGCCG GACTGCCGGG CATGAGCGCG CCGGCGGGAT TCGGCGAGGG GGGGCTGCCG GTCGGCCTGC AGCTGATCGG CAACTACTGG CAGGAGGCGC AGCTGCTGCA CGCCGCCCAC AGCTTCCAGC AAGCCACCGA TTTCCACCTC CGGACGCCGG AGGGCTACTG A
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Protein sequence | MSTELHQLGV ADLSARLAAK TVSTAEVTSH LLARVAAHEH LGAFLCTDVE LALQQARAAD ERRARGETLG ALDGVPLAHK DIFVTTDFPS TAASKMLAGY RSPFDATVVA KLKAAGTVTL GKLNCDEFAM GGSNENSAIR PVRNPWDAER IPGGSSGGSA VAVAARLVPA TTGTDTGGSV RQPASLSGVT GIKPTYGRCS RYGMIAFASS LDQAGPIAKS AEDCALLLGA MSGFDERDAT SAQQPVPDFA ALLRAPRDGA SAGRPLHGLR IGLPREFFGA GVAGDVTQAV RAALAEVEKL GATLVDVSLP RTELSIPVYY IIAPAEASSN LGRFDGVRYG HRAAQYGDLL DMYRKSRSEG FGAEVKRRIM IGTYVLSHGY YDAYYLQAQK LRRMIADDFQ AAFAHCDLIA GPVAPTVARR LGSQTDPVAE YLADIFTLPA SLAGLPGMSA PAGFGEGGLP VGLQLIGNYW QEAQLLHAAH SFQQATDFHL RTPEGY
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