| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0060 |
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| Symbol | |
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| ID | 4783817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 55068 |
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| End bp | 56669 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640088607 |
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| Product | putative signal peptide protein |
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| Protein accession | YP_001019257 |
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| Protein GI | 124265253 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0678938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTT CGATGGCTTC TGACCGACGC CGCCGCTGGC CGCGTGCTCT GCCGCTGGCC
TTGAGCCTGG CCCTTGCCGC ACAAGGCCTG GCGCCCGCCG CCCTGGCGCA GCAGGGCAGT
CCTGGCTCGC GCAACAACCT GCCGGCCCTG GGCGACAGCG CGTCCGACGA CATCTCGGTA
CCGAACGAGC GCCGCATCGG CGACCGCATC ATGCGCGACA TCCGACGCGA TGCGGATTAT
CTCGACGACC CGATCCTGCT CGAGTACGTG CAGACCATGA TGAGCGCGCT CATCGTGTCG
TCGCGCGAGC GCGGCAACAT CCCGACGGAG CTGGACGAGC GCTTCGCGTG GGAGGCCTTC
CTCGTGCGCG ACCGCACGGT GAACGCCTTC GCGCTGCCGG GTGGCTACAT GGGCGTGCAC
CTGGGCCTGA TGGCCATCAC GGCGACGCCT GCCGAACTGG CCTCGGTGCT GGCGCACGAG
CTGTCGCACG TGACGCAGCG GCACATCGCG CGCAGCGTGG GCGCGAACAA GCTCACGTCT
CTGGCCGGAA TCGCAGGGCT GATCCTCGGC GTGCTCGCGG CCAGTCGCAG CCCGGAGGCC
GCCAATGCGC TGATCACCGG CGGGCAGGCG GTGGCCGTGC AGGGGCAGCT GAACTATTCG
CGCGATGCAG AGCGCGAGGC CGACCGCGTG GGCTTCAACG TACTCACCGG CGCCGGCTAC
TCGCCGGCCG GCATGCCGGC GATGTTCGAG AAGCTGCTGC AGGCCTCGCG CCTGAACGAC
AGCCAGAATT ACCCTTACCT GCGCAGCCAC CCGCTGACCA CCGAACGCAT CGGCGAAGCC
CGCTCGCGCC TCGGTGTGGC CCATACCGCG CCGCCGCCCC GGCCGCTGCT GCACGTGCTG
ATGCAGGCCC GCGCCCGCGT GCTGATGGAC ACGCGCGACA GCGCGCTCCA GCGCGCCCAG
GACTTCGACA CCGAGCGGGC CCTGGCCACC GTCGCCGCGC CCGCCGACCG GCTGGGGGCG
CTGTACGGCA GTGCGCTGGC GTCGATCCTG CGGCGCGATT TCTCGCGCGC CGACGCGGCC
TTGAGCGCTG CACGTCCGCT GGCGGACGGC GACAAGGACG CCATGAATGC CTTGGCGCTG
TTGACGCTGC AAGGTCTGCT GGTGCGCAGC GATGGCATGC GCGCCGACCC CGTGCTCGGC
AGCCTGCTGG CCGCGCCGGG AGGGCAGGAC TCCCGCACGC TGCTGCTTGC GCAGGCGCAA
CGCGCGCTGC TGCCAGGCAG CCCGCCCGAG ATGCAGCGCG CGGCCGTCGA CCGCCTTCAG
ACCTGGGTGG CCGTCCACCG GCAGGATGCG CTGGCCTGGG GCAGCGCTGC GCAACTGTGG
GAACGGCTGG GTCAGCGGCT GCGGGCCGTG CGCGCGGACG CCGAGTCGCG CGCGGCGGTC
GGTGACGTGC AGGGCGCCGT CGAGCGGCTG CGTGCAGCGC AGAAGCTGGC CCGCACGGCG
ACCGGCAGCG ACTTCATCGA GGCCTCGGTG CTCGAATCCC GGCTGCGCGA GCTGGAGCTG
CAGCGCCGGC AGATCATTGC CGAGGAGCGC GGCGAGCTTT GA
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| Protein sequence | MRLSMASDRR RRWPRALPLA LSLALAAQGL APAALAQQGS PGSRNNLPAL GDSASDDISV
PNERRIGDRI MRDIRRDADY LDDPILLEYV QTMMSALIVS SRERGNIPTE LDERFAWEAF
LVRDRTVNAF ALPGGYMGVH LGLMAITATP AELASVLAHE LSHVTQRHIA RSVGANKLTS
LAGIAGLILG VLAASRSPEA ANALITGGQA VAVQGQLNYS RDAEREADRV GFNVLTGAGY
SPAGMPAMFE KLLQASRLND SQNYPYLRSH PLTTERIGEA RSRLGVAHTA PPPRPLLHVL
MQARARVLMD TRDSALQRAQ DFDTERALAT VAAPADRLGA LYGSALASIL RRDFSRADAA
LSAARPLADG DKDAMNALAL LTLQGLLVRS DGMRADPVLG SLLAAPGGQD SRTLLLAQAQ
RALLPGSPPE MQRAAVDRLQ TWVAVHRQDA LAWGSAAQLW ERLGQRLRAV RADAESRAAV
GDVQGAVERL RAAQKLARTA TGSDFIEASV LESRLRELEL QRRQIIAEER GEL
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