| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0053 |
|---|
| Symbol | |
|---|
| ID | 4783810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 50582 |
|---|
| End bp | 51397 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640088600 |
|---|
| Product | transglutaminase-like domain-containing protein |
|---|
| Protein accession | YP_001019250 |
|---|
| Protein GI | 124265246 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.573487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.187111 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGATCA AGATCGGGTT CGACATCGAG CTGTCCGTCG CGTCGCCGAT GGCGCTCATC
CACCTGCTGC ACGTGCACCC CACGCGGCGC GACGACCTGG TGACGCCCGA GAACTTCTGG
ATCACGCCCT TCTTCGGCAA CGACGAATAC GTCGACAGCT ACGGCAACCA CTGCGGGCGC
GTCAACGTGC CGCCGGGCGT GGGCTCGGTG CGCTTCACCA ACGACGCGGT GGTGCGCGAT
TCCGGCCTGC CCGACCCGGT GGCCTACGGC GCCTGGCAGC ACGATCCACG CGACCTGCCG
TTGGCGACGC TGCAGTTCCT GCTGCCCAGC CGCTACTGCG AGGTCGACAG CGAGCTGCTG
AACTTCGCGT GGAACCAGTT CGGCCAGACG CCGTTGGGCT GGGCGCGCGT GCAGGCGATC
TGCGATTTCG TGCACGGGCA CATCCGCTTC GACTACCGGA ACGCCCGCGC CAACCGCACC
GCGCTCGAGG GCTACCGCGA GCGCACCGGC GTGTGCCGCG ACTTCGCCCA CCTGGCCGTC
ACGCTGTGCC GCTGCATGAA CATCCCGGCG CGCTACGTCA CCGGCTACCT CGGCGACATC
GGCGTGCCGC CGGCGCCCTA CCCGATGGAT TTCAGCGCCT GGTTCGAGGT CTACCTCGGC
GAGCAGTGGT ACACCTTCGA CGCCCGCCAC AACCAGCCTC GCATCGGCCG CATCGTGATG
GGCCGCGGCC GCGACGCCGG CGACGTGCCG ATCACGATGG CCTTCGGGCA GAACCAGCTG
CTGCGCTTCG AGGTGACGAC CGAAGAGGTG TCATAA
|
|---|
| Protein sequence | MLIKIGFDIE LSVASPMALI HLLHVHPTRR DDLVTPENFW ITPFFGNDEY VDSYGNHCGR
VNVPPGVGSV RFTNDAVVRD SGLPDPVAYG AWQHDPRDLP LATLQFLLPS RYCEVDSELL
NFAWNQFGQT PLGWARVQAI CDFVHGHIRF DYRNARANRT ALEGYRERTG VCRDFAHLAV
TLCRCMNIPA RYVTGYLGDI GVPPAPYPMD FSAWFEVYLG EQWYTFDARH NQPRIGRIVM
GRGRDAGDVP ITMAFGQNQL LRFEVTTEEV S
|
|---|
| |