Gene Mpe_A0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A0050 
Symbol 
ID4783807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp47465 
End bp48262 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content73% 
IMG OID640088597 
ProductRNA polymerase sigma factor for flagellar operon 
Protein accessionYP_001019247 
Protein GI124265243 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00204994 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.175204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCCC GCAAGCCAGG GACTCAAGTT CCAGCGGCGG TGACCGACAA CACGGCCATG 
GCTCCCTCCA CCGCCGACAC CGCGGCCACC GTGCGCAACG AGCAGTTGCA CCAGCACGGC
GCGCTGGTGC GCCGCATCGC CAAGCGCATG CGCGCGCGGC TGCCGGCCAA CGTGGAGATG
GACGAGCTGT TGCAGGCCGG CCTGATCGGC CTGAACGAGG CGATCACCCG CTTCGAGGAA
AGCTTCGGCG CCAGCTTCGA CACCTATGCC TCGCGCCGCA TCGAAGGCGC CATGCTCGAC
AGCCTGCGCG CCGCCGACAC CCTGTCGCGC GACGCCCGTG CCCACCAGCG CGCCATCCGC
GCCGCGGTGC AGGCGCTCGA GCACCGCCTG CTGCGCCCGC CGCGCGCGAT GGAAGTGGCC
AGCGAGCTCG GCTGGTCGCT GGCGCGCCTG CACCAGCGCC TGGTGGAGGC CGGCGCCGCC
GGCCAACGCG CCGGCGACGC GCCGCTCGAC GGCCTGGCTG ACGAGGCCTC GGCCCGCGGC
GCCGAGGACG ACCTGCACGC CACCGCCGAC GACCACGCCG ACCCGCTGGC CGCCCTGCAG
CGCCGCCAGC GCACGACAGC CCTCAACGCG GCGTTCGACA CGCTCGAAGA GCGCGAGCAG
CTGATGATGA AGATGATCTA CGAGCGCGGC CTGGACCACC AGGACGCCGC CGAGTCGCTG
GGCGTCAGCC CCTCGCGCGT GTCGCAGATG CACGCGGTGG TGGTGCAGAA GCTCAAGCGG
CGGTTGAAGG ACTGGTAG
 
Protein sequence
MSPRKPGTQV PAAVTDNTAM APSTADTAAT VRNEQLHQHG ALVRRIAKRM RARLPANVEM 
DELLQAGLIG LNEAITRFEE SFGASFDTYA SRRIEGAMLD SLRAADTLSR DARAHQRAIR
AAVQALEHRL LRPPRAMEVA SELGWSLARL HQRLVEAGAA GQRAGDAPLD GLADEASARG
AEDDLHATAD DHADPLAALQ RRQRTTALNA AFDTLEEREQ LMMKMIYERG LDHQDAAESL
GVSPSRVSQM HAVVVQKLKR RLKDW