| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0048 |
|---|
| Symbol | |
|---|
| ID | 4783805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 45934 |
|---|
| End bp | 46704 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640088595 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001019245 |
|---|
| Protein GI | 124265241 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00965819 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.1661 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCG CCGACGCCTC GTCCTCCTTC GCCTTCAAGG TGCTGACCGT GAACACCCAC
AAGGGCTTCA CCTCGTTCAA CCGCAAGTTC ATGCTGCATG AGCTGCGCGA CGCAGTTCGC
ACCGTGGGTG CCGACGTGGT GTTCCTGCAG GAAGTGCAGG GCACGCACGA GCGCCACACG
GCCCGCCTCG CCAACTGGCC GGCGGTGCCG CACTACGAGT TCCTGGCCGA CTCGATCTGG
CCTCAGTTCG CCTACGGCCG CAACGCGGTC TATCCGCACG GCCACCACGG CAACGCGGTG
CTGTCCAAGT TCCCGATCCT GCGGCACGAG AACCTCGACG TGTCGATCAG CGGGCCCGAG
CGGCGCGGCC TGCTGCACTG CGTGCTGCAG TTGCCCGGCC GCAGCGCCAA CGTGCACGCG
GTGTGCGTGC ACCTGGGCCT GCAGGAGTCG CACCGCAGCC GCCAGCTCGC GCTGTTGTGC
GAGCTGGTCG AGCGCGAGGT GCCGGCCGAC GCGCCGCTGG TGGTGGCCGG CGACTTCAAC
GACTGGCGGC GCAGCGCGCA CCGCGTGCTG GAGCACCGCG CCGGCCTGCG CGAGGTGTTC
CTGCACTCGG GAGGCACTTC CGCCCGCACC TTCCCGGCCC GCTTCCCGAT GCTGCAGCTC
GACCGCATCT ACGTGCGCAA CGCCGCGGTG CACGCACCCA TGGTGCTGCC GCGCAGGCCG
TGGTCGCACC TGTCGGACCA TGCGCCGCTG GCAGCGGAGA TCTCGCTGTG A
|
|---|
| Protein sequence | MSSADASSSF AFKVLTVNTH KGFTSFNRKF MLHELRDAVR TVGADVVFLQ EVQGTHERHT
ARLANWPAVP HYEFLADSIW PQFAYGRNAV YPHGHHGNAV LSKFPILRHE NLDVSISGPE
RRGLLHCVLQ LPGRSANVHA VCVHLGLQES HRSRQLALLC ELVEREVPAD APLVVAGDFN
DWRRSAHRVL EHRAGLREVF LHSGGTSART FPARFPMLQL DRIYVRNAAV HAPMVLPRRP
WSHLSDHAPL AAEISL
|
|---|
| |