Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0034 |
Symbol | |
ID | 4785318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 34465 |
End bp | 35067 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 640088581 |
Product | hypothetical protein |
Protein accession | YP_001019231 |
Protein GI | 124265227 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3109] Activator of osmoprotectant transporter ProP |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00139041 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0848547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCCTGC CGCTGAAGCT GGGCATCCAG GCCGATATCC AGCAGCGGGC GCCGGGCGTG TTCACGAAGA AGTCGCTGTC GGCTTTCCTG CACCGGCACA CGACCAGCAC CGCCTACCTG AAGGCGCTGG TGGGTGCCGC GCATCGCGTC GACCTCGACG GCCAGCCGGC CGGCGACGTG GCCGATCTGC ACCGCGCTGC CGCGACCGGG GAGCTGGACC GCCGCCGCGC GCTGCACGAT GCGCGCCGCG CGGCCGAGCG CCAGGCGCAA CGCGCTGCCC AAGACGAAGC CCGACAGGCC CACAGCGCAG CCGAGGCAGC GCAGCGCGAG CGCGCGGCAC TGCTGCGGGC CTACGAGACC AGCACGCTGA CGCGGGCCAA CTTCTGCGCG CTCAAGGGGC TGACGGAAGC GGACCTCGAC GCCGGGCTCG CGCAGGCGCG TGAAGAGCGG GACCGGCGCG CCTCGCAGCC GCAGCCGCCG CAACGACCGC CCCAGCAGCG CCGCCCGCCG GACGCCGCCG CGCGCGGCGA TCGCGATCCG CGCGGCACAC GACCTCCCGG CGCGCGCCGC GGTCCGCCGG GGCCGCGCCG GCCAGGCCGC TGA
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Protein sequence | MFLPLKLGIQ ADIQQRAPGV FTKKSLSAFL HRHTTSTAYL KALVGAAHRV DLDGQPAGDV ADLHRAAATG ELDRRRALHD ARRAAERQAQ RAAQDEARQA HSAAEAAQRE RAALLRAYET STLTRANFCA LKGLTEADLD AGLAQAREER DRRASQPQPP QRPPQQRRPP DAAARGDRDP RGTRPPGARR GPPGPRRPGR
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