| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0019 |
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| Symbol | |
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| ID | 4785303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 21840 |
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| End bp | 23126 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640088566 |
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| Product | putative RNA polymerase sigma factor |
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| Protein accession | YP_001019216 |
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| Protein GI | 124265212 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.962895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.592717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGACGA CCGACACGCA GCGCGCGATC GATGCCGTCT GGCGCATCGA ATCGGCGAAG
ATCGTCGCCG TGGTCGCGCG CATGGTGCGC GACGTCGGCG TGGCCGAGGA GCTGGCGCAG
GATGCGCTGG TCGCCGCGCT CGAGCACTGG CCCGTCGACG GCCTGCCCGA CAAGCCCGGG
GCCTGGCTGA TGACCACCGC CAAGCACCGC GCGCTCGACC GGCTGCGGCA GGACGCGCTG
CACGCGCGCA AGCAGCAGGA GCTCGGCGCC GACCTCGACG CGCTGCAGGC GGGCGTGGTG
CCGGACTTCG TGGACGCGCT CGACGCGGCA CGCCAGGACG ACATCGGCGA CGACCTGCTG
CGCCTGATCT TCACCGCCTG CCATCCGGTG CTCGGCACCG AGGCGCGCGT GGCCCTCACA
CTGCGCCTGC TGGGCGGGCT GAGCACCGAC GAGATCGCGC GCGCCTTCCT GGCGCCGGAG
GCGACGATCG CGCAGCGCAT CGTGCGCGCC AAGCGCACGC TGAGCGCGGC CCGCGTGCCC
TTCGAGGTGC CGCAGGCGCA GGAACGCGCG CCGCGCCTGG CCTCGGTGCT GGAGGTGGTC
TACCTGATCT TCAACGAGGG CTACTCGGCC ACCGCCGGCG ACGACTGGAT GCGCCCGGCG
CTGTGCGACG AAGCGCTGCG CCTGGGCCGC GTGCTGGCCG GGCTGGCGCC CGACGAGCCC
GAGGTGCACG GCCTGGTGGC GCTGATGGAG ATCCAGTCCT CGCGCACCGC GGCCCGCACC
GATGCGCGAG GGCGGCCGGT GCTGCTGCTC GACCAAGATC GCACGCGCTG GGACCCGCTG
CTGATCCGCC GCGGCCTGGC CGCGCTGGAG CGCGCCACGG CGCTGGGCGG CCTGCGCGGG
CCGTATGCGC TGCAGGCGGC GCTCGCGGCC TGCCATGCGC GCGCGGCGAA GGCGGCCGAC
ACCGACTGGC CGCTGATCGT GGCGCTCTAC GACGCGCTGG CCCAGGTGGC GCCGTCGCCG
GTGGTCGAGC TCAACCGCGC GGTCGCGGTC GGCATGGCCT TCGGACCAAC AGCGGGGCTG
GAAATCGTCG ACACGGTCGC ATCGAGCCCG GCGCTCGCCG GCTACCCCTG GTTGCCGAGC
GTGCGCGGCG ACCTGCTCGC CAAGCTGGGC CGCCATGACG AGGCGCGCGC GGAGTTCGAG
CGCGCCGCGG CGCTGACGCG CAATGGGCGC GAGCGCGAGC TGCTGCTGGA GCGGGCGGCT
CAGTCGCGCG ATGCCGGCCG CAGGTAG
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| Protein sequence | MATTDTQRAI DAVWRIESAK IVAVVARMVR DVGVAEELAQ DALVAALEHW PVDGLPDKPG
AWLMTTAKHR ALDRLRQDAL HARKQQELGA DLDALQAGVV PDFVDALDAA RQDDIGDDLL
RLIFTACHPV LGTEARVALT LRLLGGLSTD EIARAFLAPE ATIAQRIVRA KRTLSAARVP
FEVPQAQERA PRLASVLEVV YLIFNEGYSA TAGDDWMRPA LCDEALRLGR VLAGLAPDEP
EVHGLVALME IQSSRTAART DARGRPVLLL DQDRTRWDPL LIRRGLAALE RATALGGLRG
PYALQAALAA CHARAAKAAD TDWPLIVALY DALAQVAPSP VVELNRAVAV GMAFGPTAGL
EIVDTVASSP ALAGYPWLPS VRGDLLAKLG RHDEARAEFE RAAALTRNGR ERELLLERAA
QSRDAGRR
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