| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0016 |
|---|
| Symbol | |
|---|
| ID | 4785300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 18623 |
|---|
| End bp | 20065 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640088563 |
|---|
| Product | coenzyme F390 synthetase-like protein |
|---|
| Protein accession | YP_001019213 |
|---|
| Protein GI | 124265209 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0110032 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGC AGCATCCCGC GCCGCCCTTC GACACGTGGC TGTGGATGCA GGCGTGGAGC
GAGACCTGGT GCGCCGGGCT CGACCCGGCG GGCGCGGGGC AGCGCCTGCG CGCTCAGCGG
CTGGCGCGGC TGATCGACGC CACGCTGAGC GGCTCGCCGT TCTACCGCCG GCGCCACCCC
GGAGCGCACG AGCTCGCCGA CTTCCGGCCG GTGAGCAAGG CCGAGCTGAT GGCGCACTTC
GACGACTGGG CCACCGACCG CCGCATCACC CGCGCCGCCG CACAGGCCTT CGTGGCCGAC
CCGGCGTGCA TCGCCGACGG CTGGCTCGGC AACTATCTGC TGTGGACCAG CTCCGGCACC
AGCGGCGAGC CCGGCGTGTT CGTGCAGGAC GCGCGCAGCC TGGCGGCCTA CGACGCGATC
GACGCGCTGC GGCTGCGCGG CGCCGGGCCC GGCCAGGTCT CGCTCGGCAG CTGGGGCGCG
CGCCAGCGCT TCGCCTTCGT GGGTGCCACC GGCGGCCACT TCGCCGGCGT GGTGAGCATG
GAACGGCTGC GCCGTCTGGT GCCGGCCGCG CTGGCACCGG AGATCCGCGT GCTCTCGGTG
CTGGAGCCGC TGTGCGACGT GGCGCAGGCG CTGCAGGCCC AGCAGCCCAG CGTGCTGATC
ACCTACCCGA GCTGCGCCGC CGCGCTGGCC CGGCTGCAGG AGGCCGGACA GCTGCGGCTG
GCCCTGAAGG AGGTGTGGAC GGGCGGCGAG CAGCTCTCGG CCGAGCAGCG CCAGCAGATC
CAGGCCGCCT TCGGCTGCCC GGTGCGCAAC AACTACGGCG CCTCGGAGTT CTTCACCATC
GCGTGGGAGT GCGCCCACGG CGAGCTGCAC CTGAACGACG ACTGGCTGGT GCTGGAGCCG
GTGGACGAGC GGCTGCGGCC GTTGCCGGTG GGCGAGATGT CGCACAGCAC GCTGCTGACC
AACCTGGCCA ACCTGACGCA GCCGCTGCTG CGCTACCAGC TCGGCGACCG CGTGCGCCGC
GTGGCGGAGC GCTGCAGCTG CGGCAGCGCC TTCCCGCTGA TCGAGGTGCA GGGCCGCGCC
GACGACACGC TGCGGTTGCG CGACGCGCAG CACCGGCCGG TGACCATCCT GCCGCTGGCG
CTGGAGACCG CGATCGAGGA GGGCGCGCAC GTCACGCAGT TCCAGGCGCT GTGCGGCAGC
GATGGCGATT CGATCGAGCT GCGCTTCGAG GCCTCGGTGG GCGACGCGCG CGCGGCGTTC
ACGCAATCGC GGCGCGCGCT CGCCGACTTC CTGGCGCACC ACGGCGTGAG CGGCACGCGC
ATCTCGATGA GCGCGGCCGA GCCGCTGCGC CAGCGCGCAA GCGGCAAGCT GCGCCGCGTG
GTGATGCTGC CCGCTGCGCC GGTGCGTCGC AAGCCCCCGG CACGCGCGCC CGCTCGGCGC
TGA
|
|---|
| Protein sequence | MTAQHPAPPF DTWLWMQAWS ETWCAGLDPA GAGQRLRAQR LARLIDATLS GSPFYRRRHP
GAHELADFRP VSKAELMAHF DDWATDRRIT RAAAQAFVAD PACIADGWLG NYLLWTSSGT
SGEPGVFVQD ARSLAAYDAI DALRLRGAGP GQVSLGSWGA RQRFAFVGAT GGHFAGVVSM
ERLRRLVPAA LAPEIRVLSV LEPLCDVAQA LQAQQPSVLI TYPSCAAALA RLQEAGQLRL
ALKEVWTGGE QLSAEQRQQI QAAFGCPVRN NYGASEFFTI AWECAHGELH LNDDWLVLEP
VDERLRPLPV GEMSHSTLLT NLANLTQPLL RYQLGDRVRR VAERCSCGSA FPLIEVQGRA
DDTLRLRDAQ HRPVTILPLA LETAIEEGAH VTQFQALCGS DGDSIELRFE ASVGDARAAF
TQSRRALADF LAHHGVSGTR ISMSAAEPLR QRASGKLRRV VMLPAAPVRR KPPARAPARR
|
|---|
| |