| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0002 |
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| Symbol | |
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| ID | 4783959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1824 |
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| End bp | 2930 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640088549 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001019199 |
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| Protein GI | 124265195 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0430732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTCT TGAAGAGCCC GCAGGAAAAA TTTCTGGGTG CACTGCAAGC CGTCGCCGGC
ATCGTCGAAC GGCGTCATAC CTTGCCGGTG CTGGCCAACG TGCTGATGCG CAAGACCGGC
AACGCGATCG AATTCACCAC CAGCGATCTC GAGATCCAGG TCCGCACCCA GGCCGAGTTC
GACGGCGACG CCGGCAACTT CAGCACCACG GTCGGAGCGC GCAAGCTGAT CGACATCTTG
CGCACCCTGC CGGCCGACCA GAACGTGACG CTCAGCAGCG CGCAGAACAA GCTCACGCTC
ACCGGCGGCA AGAGTCGCTT CACGCTGCAG ACGCTGCCGG CGGAAGACTT CCCGCTGGTG
CAGGAGGCAG CTGATTTCGG CCCGGCCTTC AGCGTGCCGC AGAAGAGCCT GAAGGCGCTG
ATCGCCCAGG TGCACTTCGC GATGGCGGTG CACGACATCC GCTACTACCT CAACGGCATC
CTGTTCGTCG CCGAGGGCAA GAGTCTCACG CTGGTGGCCA CCGACGGCCA CCGCCTGGCG
CTGGCCCAGG CCACGCTCGA TGTGGAGATG CCCAAGCAGG AAGTCATCCT GCCGCGCAAG
ACCGTGCTGG AGCTGCAGCG CCTGCTGAAG GACGAAGACA CCGCCATCGA GATGCGCTTC
GCCGGCAACC AGGCCAAGTT CGCGTTCTCG GGCATGGAGT TCGTGACCAA GCTGGTCGAG
GGCAAGTTCC CCGACTACAA CCGCGTGATC CCCAAGAACC ACAAGAACCA CGTGACGCTG
GGCCGTGCGC CGCTGCTGGC CAGCCTGCAG CGCGCCGCCA TCCTGACCAG CGAGAAGTTC
AAGGGCGTGC GCCTGAACTT CGACCCCGGC ACGCTGCGCA TCGCCTCCAG CAACGCCGAG
CAGGAAGAGG CCAAGGAAGA GCTCGAGATC GACTACGGCG GCGACGCCAT CGAGATCGGC
TTCAACGTCA CCTACCTGAT GGACGTGCTG GCCAACATGG GCCAAGAGAT GGTCACCTTG
TCGCTGCAGG ATTCCAACAG CTCGGCTCTC GTCACCGTGC CCGAGCAAGG CGGCTTCAAG
TACGTGGTGA TGCCGATGCG GATCTAG
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| Protein sequence | MIVLKSPQEK FLGALQAVAG IVERRHTLPV LANVLMRKTG NAIEFTTSDL EIQVRTQAEF
DGDAGNFSTT VGARKLIDIL RTLPADQNVT LSSAQNKLTL TGGKSRFTLQ TLPAEDFPLV
QEAADFGPAF SVPQKSLKAL IAQVHFAMAV HDIRYYLNGI LFVAEGKSLT LVATDGHRLA
LAQATLDVEM PKQEVILPRK TVLELQRLLK DEDTAIEMRF AGNQAKFAFS GMEFVTKLVE
GKFPDYNRVI PKNHKNHVTL GRAPLLASLQ RAAILTSEKF KGVRLNFDPG TLRIASSNAE
QEEAKEELEI DYGGDAIEIG FNVTYLMDVL ANMGQEMVTL SLQDSNSSAL VTVPEQGGFK
YVVMPMRI
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