Gene P9303_29741 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_29741 
Symbol 
ID4778462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp2627959 
End bp2629254 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content50% 
IMG OID640088498 
Productputative urea ABC transporter, substrate binding protein 
Protein accessionYP_001018969 
Protein GI124024662 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID[TIGR03407] urea ABC transporter, urea binding protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTT CATTCTCAAA GCGCCTTGTG GCTGGCTTCG CCGCAACCGC CGTTGGTGTC 
AGCATTACGG CTTGCGGTGG TGGTAGTGAT AAAACCGCTA ATACCGATTT CGACGACACG
GTCACGGTTG GTATCCTCCA TTCCTTAAGT GGCACCATGG CCATCTCGGA GTCCACCCTT
GTGGACACAG AGAAAATGGC GATTGAAGAG ATCAACGCTG CCGGTGGTGT TGAAGTTGAT
GGCAAGAAAT ACAAGATTGA CTACATCGTT GAAGATGGCG CTTCTGATTG GCCAACCTTC
GCTGAGAAGT CCAAGAAGTT GATCGATCAG GATAGTGTTC CTGTTGTCTT TGGTGGTTGG
ACTTCCGCAA GCCGTAAGGC GATGCTGCCG GTTTACGAAT CGAAGAATGC ATTCCTCTAT
TACCCGATTC AGTACGAAGG CCAGGAGTGT TCCAATAACA TCTTCTACAC AGGTGCGACT
CCGAATCAGC AGTCGGAACC TGCAACCAAG TTCATGTTCG AGAAGTCGCC TGCTGCTGGC
AAGCCCTTCT TCCTTGTAGG TTCTGATTAC GTTTTCCCTC GCACCTCCAA TACCATCACT
AAGGAGCAGG TCAAAGCTCT GGGTGGGAAA GTTGTCGGAG AGGATTATTT GCCCCTCGGC
AACACTGAAG TGGCGCCGAT CATTGCCAAG ATCAAGAAGG CATTACCTGA CGGTGGTGTG
ATCATCAACA CCCTCAATGG TGACCAGAAC GTCGCTTTCT TTAAGCAGAT TCAGGATGCC
GGACTTACTC CTGCAAATGG CTACTACGTG ATGAGCTATT CCATCGCGGA AGAAGAGATC
AGCACGATCG GGCCTGAGTT CCTTGAGGGA CACTATGGGG CTTGGAATTA CATGATGTCG
ATTGATACGC CTGCTTCGAA GAAGTTTGCA TCTGACTTCA AGGCCAAATA TGGCAATGAC
CGTCAGGTTG CTGACCCTCA GGAGTCGGCT TACAACATGG TGTATCTGTG GAAAGCTGCG
GTCGAGAAGG CCAATAGCTT TGATGACGAC AAGGTACGTG AAGCTTTGAT CGGAATTGAG
TTTGATGCGC CTCAGGGCCC TGTGAAAGTG ATGCCAAACC ATCACCTGTC GCAGACCGTA
CGTATCGGCA AGATCACCGA AGATGGTCAG TTCGAGATTC TCGAAGAGAC AAATGGCCCT
GTGGCTCCAC AGGCTTGGAA CCAGTTCGAG CCAAGTTCTA AGGGCTATGC TTGTGATTGG
ACTGATGCCA ACAAAGGCGA GAAGTACAAG CTTTGA
 
Protein sequence
MNVSFSKRLV AGFAATAVGV SITACGGGSD KTANTDFDDT VTVGILHSLS GTMAISESTL 
VDTEKMAIEE INAAGGVEVD GKKYKIDYIV EDGASDWPTF AEKSKKLIDQ DSVPVVFGGW
TSASRKAMLP VYESKNAFLY YPIQYEGQEC SNNIFYTGAT PNQQSEPATK FMFEKSPAAG
KPFFLVGSDY VFPRTSNTIT KEQVKALGGK VVGEDYLPLG NTEVAPIIAK IKKALPDGGV
IINTLNGDQN VAFFKQIQDA GLTPANGYYV MSYSIAEEEI STIGPEFLEG HYGAWNYMMS
IDTPASKKFA SDFKAKYGND RQVADPQESA YNMVYLWKAA VEKANSFDDD KVREALIGIE
FDAPQGPVKV MPNHHLSQTV RIGKITEDGQ FEILEETNGP VAPQAWNQFE PSSKGYACDW
TDANKGEKYK L