Gene P9303_29731 details

Gene Information

• Locus tag: P9303_29731
• Symbol: livH
• ID: 4778461
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: -
• Start bp: 2626706
• End bp: 2627860
• Gene Length: 1155 bp
• Protein Length: 384 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640088497
• Product: putative urea ABC transporter
• Protein accession: YP_001018968
• Protein GI: 124024661
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0559] Branched-chain amino acid ABC-type transport system, permease components
• TIGRFAM ID: [TIGR03409] urea ABC transporter, permease protein UrtB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCAACTGC TTCTTGAAAG TCTTTTCAAT GGTGTGGCCA TCGGCTCGGT GCTGCTGGTT 
GCTGCCCTCG GACTGGCGAT AGTCTTCGGC CTGATGGGTG TCATTAACCT CGCCCATGGC 
GAGTTGATCA TGCTCGGGGC CTACACCACT TATGTGGTAC AGCTGATCTT CAAGCTGCCT 
GCTTTGCAGC CTGTCTACAA CGCTTATGTG TTGGTGGCGA TTCCTCTGGC CTTCATCGTT 
AGTGGTGTGG TTGGTATCTT GCTAGAACGC ACCGTGATTC GTCGTCTCTA CGGCAACCCG 
TTGGAGACAT TGTTGGCGAC ATGGGGCGTC AGCCTGATTC TGCAGCAGTT TGTGCGCAGT 
GTTCCATTGG CTTATGCGGC TGGCTTGGTG CTGGCGTTAG TGCTTGGCTT TAGTCTGCCG 
ATCATTCTTC CTGACAAGCT TTTGCAGGGG CCGCGGGCCC GCCTGGTGCG TGCTGGAAGC 
TGGCTTGTGT CGGCTCTGGC TGGGGTGTTA CTGGCGGGTG GCTTGGCCTC TCAGATCAGT 
CGTATCGCTC GTGCGACCTC TCGCAATGTC GATGTCACGG CACCTAAGTG GATGCGTGGG 
GGGATTGAAC TGTCGGGCAT GACCTTCCCT GTGCCACGCT TAGTGATCAT TGTGATCACG 
ATCCTCGCTG TACTCGGTAT CACCTGGTTC TTGAATCGCA GTGTGTGGGG GATGCGCATC 
AGGGCAGTGA CTCAGAATCG CTCCATGAGT GATTGCCTTG GTATCTCAAC CGATACCGTG 
GATGTGCTTA CCTTTGGTAT CGGCTCCGGT TTGGCTGGCA TCGCGGGGGT AGCGGTGTCT 
CTGTTGGGAT CCGTGGGACC CAACGTCGGC ACTTCTTATA TCGTTGGTTG CTTCATGGTG 
GTGGTGCTTG GCGGCGTGGG AAATCTGTTC GGCACCGTGT TGGCCTCCTT TGCTATTGGG 
GTGCTAACAG ACCTGATCGG TGCTGGCCGT TTGCTCAGTA TCTGGCCTTC GATGCCTGCG 
CCTTTGGCGA GCGTGGTTGA TTTTTTTGCT ACCACGAGCA TGGCCCAGGT GATGGTCTTT 
GCGCTGATTG TGGTGTTCCT TCAGTTCCGT CCTGCTGGTC TGTTTCCCCA GAGGGGACGC 
ATGGTGGAGG CTTAA 

 

Protein sequence

MQLLLESLFN GVAIGSVLLV AALGLAIVFG LMGVINLAHG ELIMLGAYTT YVVQLIFKLP 
ALQPVYNAYV LVAIPLAFIV SGVVGILLER TVIRRLYGNP LETLLATWGV SLILQQFVRS 
VPLAYAAGLV LALVLGFSLP IILPDKLLQG PRARLVRAGS WLVSALAGVL LAGGLASQIS 
RIARATSRNV DVTAPKWMRG GIELSGMTFP VPRLVIIVIT ILAVLGITWF LNRSVWGMRI 
RAVTQNRSMS DCLGISTDTV DVLTFGIGSG LAGIAGVAVS LLGSVGPNVG TSYIVGCFMV 
VVLGGVGNLF GTVLASFAIG VLTDLIGAGR LLSIWPSMPA PLASVVDFFA TTSMAQVMVF 
ALIVVFLQFR PAGLFPQRGR MVEA