Gene P9303_28711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_28711 
Symbol 
ID4778829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp2542584 
End bp2543588 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content45% 
IMG OID640088394 
Producthypothetical protein 
Protein accessionYP_001018866 
Protein GI124024559 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCC GAACTACTGC TCTTGCTGCT GCACTATCGC TTCTGCCGTT AGGACAACCG 
CTGCTACTGG GATCTACTTA TGCTCTAGCA ACTGCGGCGG TGGTGCTTTC AACCCAGGCA
GCACATGCTC AAAGTGCCGG TGATTATGTA AATGCAGGAA TTGAGAAAGG TAAGCGTGGT
GACTTTAAAG GAGCAATTGC TGATTTCACA CGGGCAATAG AGATTGATCC GCAGTATGCC
CGTGCCTACG GCAACCGTGG TTTTGCCAAG AGTAATTTAA AAGACTATCA AGGAGCAATT
ACTGATTACA AAAAGGCAAT AGAGATTGAT CCGCAGTATG CCCGTGCCTA CTTCAACCGT
GGTTTTGCCA AGAGTAATTT AAAAGATTAT CAAGGAGCAA TTGCTGATTT CACACGGGCA
ATAGAGATTA ATCCGCAACT TGCCGATGCC TACTTCAACC GCGGTCTTGC CAAGGATGAT
TTAAAAGATT ATCAAGGAGC AATTGCTGAT TACACAAAGG CAATAGAGAT TAATCCGCAG
TATGCCGCTG CCTACAACAA CCGCGGTCTT GCCAAGGTTA AATCAGGAGA TACTCAAGGA
GCAATTGCTG ATTGGGGTAA GGCGATAGAG ATTAATCCGC AGTATGCCGC TGCCTACTAC
AACCGCGGTC GTGCCAAATA TGATTTAAAG AGTTATCAAG CAGCAATTGC TGATTACAAC
AAGGCAATAG AGATTAATCC GCAACTTGCT ATTGCCTACT ACAACCGCGG TCTTGCCAAG
AGTGATTTAC AAGACTATCA AGCAGCAATT GCTGATTACA CAAAGGCAAT AGAGATTAAT
CCGCAACTTT CACGTGTCTA CAGAAACCGT GGCATCACCA AGGAAAACAA TGGAGATTTA
AAAGGTGCTT GTAGCGACTA CAAAAAGGCA GTATCTCTTG GAAATCAAGG AACAACGCAA
TGGTTAAATG CCAAGGGTGG CACCTGGTGC CGCAATATGC GATGA
 
Protein sequence
MTRRTTALAA ALSLLPLGQP LLLGSTYALA TAAVVLSTQA AHAQSAGDYV NAGIEKGKRG 
DFKGAIADFT RAIEIDPQYA RAYGNRGFAK SNLKDYQGAI TDYKKAIEID PQYARAYFNR
GFAKSNLKDY QGAIADFTRA IEINPQLADA YFNRGLAKDD LKDYQGAIAD YTKAIEINPQ
YAAAYNNRGL AKVKSGDTQG AIADWGKAIE INPQYAAAYY NRGRAKYDLK SYQAAIADYN
KAIEINPQLA IAYYNRGLAK SDLQDYQAAI ADYTKAIEIN PQLSRVYRNR GITKENNGDL
KGACSDYKKA VSLGNQGTTQ WLNAKGGTWC RNMR