Gene P9303_28701 details

Gene Information

• Locus tag: P9303_28701
• ID: 4778393
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: -
• Start bp: 2540760
• End bp: 2542508
• Gene Length: 1749 bp
• Protein Length: 582 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640088393
• Product: hypothetical protein
• Protein accession: YP_001018865
• Protein GI: 124024558
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; [COG5010] Flp pilus assembly protein TadD, contains TPR repeats

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACTCGCC GCAGAAGAAC GGCACTTGCT GCTGCACTCT CTTTGCTGCC AATAGGACAA 
CCTCTGCTCC TGGGCACTCT TACTGGCACC ACAACTGCAA CCACAGCAGT CATTCTTCAA 
GCAGCACCAG TATTTGCTCA GGATGTTTCT GCTGTTGCCC GTATCGCCAA GGCAATCACT 
GTTCGCATAG AAGGTGCAAC ACAAGGTTCA GGGGTGCTCG TCAAGCAAGA AGGCAATCGC 
TACACGGTGC TTACGGCATG GCATGTAGTT AGTGGCAATA GACCAGGAGA AGAGGTTGGG 
ATCTATACCT CTGATGGGAA TGAGCACCAA CTAGAGCAAG GCAGCATCCA AAGGTTGGGA 
GAGGTTGATA TGGCAGTGCT CTCCTTCTCT AGTGGCAGTG CTTATGAGGT GGCAAATGTT 
GGTGATATCA AAAAGGTCAA GCATGATCAA CCCATTTATG TGGCAGGTTT TCCTTTAAAT 
AACTCACAAA ACCTTCGCTA TGAAACTGGA GAGGTTGTTG CTAATGCAGA GGTAGGAATT 
GATCAGGGGT ATCAACTCCT TTATGACAAC ACAACAGTCG CTGGAATGAG TGGTGGGGTG 
CTGCTGAATT CTGATGGAGA TTTGGTGGGA CTTCATGGCA GGGGAGAGAG AGATGAACAG 
GCATCAAGTG GTGAGTTAGT AATGAAGACA GGGGTGAATC AAGGCGTGCC AATTACTTAC 
TACAACCTCT TTGCAAGTGG TGCTCCTGTT GTTGTTGCCA AGAACACTGC AACCACTGCT 
GATGACTATC TGGCGCAAGC AAAAGCATCC CAGTCAAGGA AGGGAAGAGA GCAGACAGTT 
ATTAAGTTAA CAACCCAGGC ATTAGCATTG CGATCAAGTG GAGGAGGATA CTTTCTTCGT 
GCTTATGCCA AGAAGAAATT AAAAGACTAT CAAGGAGCAA TTGCTGATTA CAGCAAGGCA 
CTAGAGATTA ATCCGGAGGA TGCTAATACC TTCAACAACC GTGGTAATGC CAAGCATGGA 
TTAGGAGATT ATCAAGGAGC AATATCTGAT TACACCAAGG CAATAGAACT TGATCCACAG 
CATGCTCTTG CCTACGACAA CCGTGGTTAT TCCAAGCATG ACTTAAAAGA TTATCAAGCA 
GCAATTGCAG ATTACAACAA AGCAATAGAG ATTGATCCGC AGTATGCCAT TGCCTACAAC 
AACCGTGGTA CTGCTAAGGA TGATTTAAAA GATTATCAAG GAGCAATCGC TGATTACAAC 
AAGGCAATAG AACTTGATCC ACAGCATGCC TTTGCCTTCT CCAACCGTGG TATTACCAAG 
AGAAACTTAG GAGATACTCA AGGAGCAATC GCTGATTACA ACAAGGCAAT AGAGATTAAT 
CCGCAGAATG CCATTGCTTA CAACAACCGT GGTCTTGCTA AGAGTAATTT AGGTAGTTAT 
CAAGAAGCAA TCGCTGATTG CAACAAGGCA ATTCAGATTG ATCCGCAGTA TGCCGGTGCC 
TACAATAGCC GTGGATGGAT AAAATATCTA CAAGGAGATT TTCAAGGTGC TCTTAAGGAT 
GCTAACAAAG CACTAGCAAT TGCTCCAAAT GATGGTGCGA CATTAGACAC CCGTGGTCTT 
GCAAAACATG CGCTTGGTCA AGATAGAAGT GCCTGTAAAG ATTTAAAGAG GGCATCGTCT 
CTAGGTTATC AGGGAACCTC CCAATATCTA CAAAGTGAAG AAGGTGCCTG GTGCAGCAAT 
ATGCGATGA 

 

Protein sequence

MTRRRRTALA AALSLLPIGQ PLLLGTLTGT TTATTAVILQ AAPVFAQDVS AVARIAKAIT 
VRIEGATQGS GVLVKQEGNR YTVLTAWHVV SGNRPGEEVG IYTSDGNEHQ LEQGSIQRLG 
EVDMAVLSFS SGSAYEVANV GDIKKVKHDQ PIYVAGFPLN NSQNLRYETG EVVANAEVGI 
DQGYQLLYDN TTVAGMSGGV LLNSDGDLVG LHGRGERDEQ ASSGELVMKT GVNQGVPITY 
YNLFASGAPV VVAKNTATTA DDYLAQAKAS QSRKGREQTV IKLTTQALAL RSSGGGYFLR 
AYAKKKLKDY QGAIADYSKA LEINPEDANT FNNRGNAKHG LGDYQGAISD YTKAIELDPQ 
HALAYDNRGY SKHDLKDYQA AIADYNKAIE IDPQYAIAYN NRGTAKDDLK DYQGAIADYN 
KAIELDPQHA FAFSNRGITK RNLGDTQGAI ADYNKAIEIN PQNAIAYNNR GLAKSNLGSY 
QEAIADCNKA IQIDPQYAGA YNSRGWIKYL QGDFQGALKD ANKALAIAPN DGATLDTRGL 
AKHALGQDRS ACKDLKRASS LGYQGTSQYL QSEEGAWCSN MR