Gene P9303_28311 details

Gene Information

• Locus tag: P9303_28311
• Symbol: speA
• ID: 4776972
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 2494564
• End bp: 2496510
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640088354
• Product: arginine decarboxylase
• Protein accession: YP_001018826
• Protein GI: 124024519
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1166] Arginine decarboxylase (spermidine biosynthesis)
• TIGRFAM ID: [TIGR01273] arginine decarboxylase, biosynthetic

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.205321
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGGCAG CCGACCCAAG CCAGGGCAAC AAGTCATGGA CCGTTGCAGA CAGTGCAGCC 
CTCTATGGCC TCGATCGCTG GGGTGAGCCC TACTTCACAG CCAACGCCAA CGGCCACGTG 
CAGGTCAAGC CACGCGGCGA TCAAGGCAGC TGCCTCGATC TGGTGGAACT GGTAGAGGAG 
CTCAAAAGCC GCAACCTCAA CTTGCCTCTG CTGATCCGCT TTGATGACAT CCTCGAAGAC 
CGACTAGAGA AACTGCACAG CGCCTTCGAA CAAGCCATTA GCAAATACGG ATACGCCGGT 
CGATATCAAG GCGTATTCCC GGTGAAGTGC AACCAACAAC GCCACGTCGT AGAACAACTG 
GTGGAAAGTG GTCGCCACTG GCACTTTGGC CTAGAGGCTG GCAGCAAGGC TGAGCTGCTG 
ATTGCTCTTT CACTCGTCAA CGACCCAGAG GCACTACTGA TCTGCAACGG CTACAAAGAT 
CAGCGCTACA TCGAAACCGC GATCTTGGCC CGCAGGCTTG GTCGCCAACC TGTAGTAGTG 
ATTGAACAAC CCGATGAGGT GGAACGGATT ATCCGCTCCA GCCAAGAGCT TGGCGCAGCA 
CCTTTCATCG GTGTACGAGC AAAGTTAACG ACACGCAGTA CGGGCCACTG GAGTAGCTCT 
GTAGGCGAGA AAGCCAAGTT CGGTCTCTCA TTCCCGGATC TGCTAAGCAC AGTGGAAGCC 
TTAAGACAAG CTGATCTCCT CAGCGATCTG CGCCTACTGC ACTTCCACAT CGGCAGCCAA 
ATCAACGACA TCGCCGTACT CAAAGACGCG ATTCAAGAAG CAGGGCAAAT TTACGTAGAG 
CTGACCAAGC TGGGAGCACC CATGGGGTAT TTAGATGTTG GGGGTGGTCT GGGTGTCGAC 
TACGACGGCA GCCGCAGCGC TAGCGCAGCA TCGACCAACT ACTCCCTACA GAACTATGCC 
AATGATGTGG TCGCAACGGT GCGCGAATGC TGTAAACCTC ATGGCATCAC TTTGCCTATC 
CTTGTGAGCG AAAGCGGACG CGCGATCGCT AGTCATTTCT CAATACTCGT TTTCGATGTA 
CTGGGCACAG GAACTGTCCC AGGAGCTGTA CCCAATCAAA CAGGAGAGGA ACCCCTCACC 
ATTCACAACC TTAGGGAGAC ACTCGCAGGA GTAATGGCAA CGCAAAAGGG TGCTGCCTCT 
GAGATATCGC GCCTACAGGA AGCATGGAAC GACGCGGTTA AATTCAAAGA CGATGCCCTC 
GCTGCCTTCC GCCTGGGTTA CATCAGTCTG ACAGAACGGG CTCTGGCGGA ACAACTCACA 
TGGGCTTGCG CCGAAGCAAT TATGGGCCAA TTGCCTTGCC ACGAAACAAT TCCCGACGAC 
TTACAAGGTT TAAGAGCTGT TCTCGCTGGC ACCTACTACG CCAACCTTTC AATATTTCGT 
TCAGCCCCAG ACACCTGGGC CATCGAACAA CTCTTCCCGC TCATGCCGAT TCATCGATTG 
AAGGAAGAGC CAACTCAGCT AGGTCACTTT GCTGACCTCA CCTGCGACTC TGACGGCAAA 
CTGGACCGCT TCATCGGGAA TGGGCAAACC AAAACTCTGC TGGAGCTTCA CAACCTGCGC 
CAAAACGAGG CTTACATGAT TGGCATGTTT CTCGCCGGTG CTTACCAGGA AGTGATGGGC 
AATCTGCACA ACCTGTTCGG CAGTACCAAT GCCGTGCACA TCCGGATGAC AACTGGTGGT 
GGCTACCAGA TAGACCACGT TGTGCGAGGC AACACCAATT CCGAGGTGCT CGAAGCAATG 
GAGCACAACC CTGAGATCCT GCTAGAGAGG CTGCGCTTGG CTAGTGAACT TGCGATTCAA 
CGAGGCGAGC TCAAGATCAA CGATGTACGC CGGCTGATGG ACCATCTAGA AACAAGCCTG 
CGTCAGACCA CGTACCTTCA AGGTTAG 

 

Protein sequence

MSAADPSQGN KSWTVADSAA LYGLDRWGEP YFTANANGHV QVKPRGDQGS CLDLVELVEE 
LKSRNLNLPL LIRFDDILED RLEKLHSAFE QAISKYGYAG RYQGVFPVKC NQQRHVVEQL 
VESGRHWHFG LEAGSKAELL IALSLVNDPE ALLICNGYKD QRYIETAILA RRLGRQPVVV 
IEQPDEVERI IRSSQELGAA PFIGVRAKLT TRSTGHWSSS VGEKAKFGLS FPDLLSTVEA 
LRQADLLSDL RLLHFHIGSQ INDIAVLKDA IQEAGQIYVE LTKLGAPMGY LDVGGGLGVD 
YDGSRSASAA STNYSLQNYA NDVVATVREC CKPHGITLPI LVSESGRAIA SHFSILVFDV 
LGTGTVPGAV PNQTGEEPLT IHNLRETLAG VMATQKGAAS EISRLQEAWN DAVKFKDDAL 
AAFRLGYISL TERALAEQLT WACAEAIMGQ LPCHETIPDD LQGLRAVLAG TYYANLSIFR 
SAPDTWAIEQ LFPLMPIHRL KEEPTQLGHF ADLTCDSDGK LDRFIGNGQT KTLLELHNLR 
QNEAYMIGMF LAGAYQEVMG NLHNLFGSTN AVHIRMTTGG GYQIDHVVRG NTNSEVLEAM 
EHNPEILLER LRLASELAIQ RGELKINDVR RLMDHLETSL RQTTYLQG