| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_27641 |
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| Symbol | mscS |
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| ID | 4777318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | + |
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| Start bp | 2431043 |
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| End bp | 2432164 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640088287 |
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| Product | small mechanosensitive ion channel, MscS family protein |
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| Protein accession | YP_001018759 |
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| Protein GI | 124024452 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAATA CGCAACAAGA GCTGCTCAAC AAAATCGATT TTTTTCAGAG TCAAGAAGGG
ATCCTGGTCG GAACTGTCTT CTTAGCTGTT CTTTGGTTGA TACTCGTTCT ACTGGATAAG
TACGGAAGGC GGATTGGCCC TCTGGTAGCG AGATCCATCC GAAGGCCCTT ATTGCTTGGA
TTTAGTTCAG CTCTTTACTT GGGTTGGCTG TTACACCTCT TGGAAGTGCA AGCTAAGGCC
TTGTTGCCTA TTAAAAGTTC AGCAGTCTCA ACTGCTCTGG TGGTGGTCGC TCTGGGCTGG
GCCACGATCA ATCTCGGCCG GGCACTGCTC CTGCAATCGA ATCGCATTCA ACTCTGGCTG
AAGGTAGAAG ATCCCAGAGA TGAGGCCATG TTGACCACCT TATTGGATCG AGTTTTCACC
ATTGGAGTCA TTGTTTTAAC TATCGCGGCC CTGATGGTGA CTTTTGGGGT GTCTACCGCA
GCAGTAGGCG CTTTGCTTGG TGGAGCAGGC ATTGGCCTCG GCTTTGGGAC ACAGCAGATA
TCTCAGAATT TCCTTGCAGG GTTCATGCTC TTTTTTACTC GTCCATTCTC AGAAGGCGAC
TGGATTAGCG TCTCGAGCTT TGATGATGGA ACAGTTGAGA AAATTGGCTG GTATCACACC
CGCATTCGTA CCTTTGATCG TCGACCACTC TATATCCCAA ATTCGATCTT TGCGACTACT
CCGATCGAGA ATCCTGGACG AATGTATAAT AGAAGAATCA AGGCCAGCAT TAGTCTTCGC
TACGAAGATC TGCCCCGTAT CGAAGCGATT ACCAAGAATG TTCGTAGTCT GCTGTTAAAC
CATCCAGACA TAGATCAAAA ACAGAGCATC TTAGTGAATT TCAACGAATG GGATAGCTCC
TCTATCAACA TGATGGTGTA TTGCTTTACT AAAACAACTG TTTGGAAAGA CTGGCTAGAT
ATTCAACAGG AGGTCTTCCT CCAGATTGCA GACATTGTTC AGAAAGCTGG TGGTGATTTT
GCATTCAATT GCACCACCCT CTATCCGGCG CCAAACCTGA ACGATGATAA TCCAATTAGT
CGCTTGGGTG AAGATCTAAA ATCGAACAGA TCGCTGCTGT AA
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| Protein sequence | MPNTQQELLN KIDFFQSQEG ILVGTVFLAV LWLILVLLDK YGRRIGPLVA RSIRRPLLLG
FSSALYLGWL LHLLEVQAKA LLPIKSSAVS TALVVVALGW ATINLGRALL LQSNRIQLWL
KVEDPRDEAM LTTLLDRVFT IGVIVLTIAA LMVTFGVSTA AVGALLGGAG IGLGFGTQQI
SQNFLAGFML FFTRPFSEGD WISVSSFDDG TVEKIGWYHT RIRTFDRRPL YIPNSIFATT
PIENPGRMYN RRIKASISLR YEDLPRIEAI TKNVRSLLLN HPDIDQKQSI LVNFNEWDSS
SINMMVYCFT KTTVWKDWLD IQQEVFLQIA DIVQKAGGDF AFNCTTLYPA PNLNDDNPIS
RLGEDLKSNR SLL
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