Gene P9303_26961 details

Gene Information

• Locus tag: P9303_26961
• Symbol: hrcA
• ID: 4778333
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 2378805
• End bp: 2379863
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 640088219
• Product: negative regulator of class I heat shock protein
• Protein accession: YP_001018691
• Protein GI: 124024384
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACAGAGC ACAAAAGAAG GGCAACCCCC CCGTACCATC AAGATCCCGA CGTCACCGCT 
TTGGAGTCGC TACCGGCACG ACAACAGCAG GTGCTTCAAG CAACGGTGCA CCACTACGTG 
GACACGATTG AGCCCGTCGG CAGCAAAACC CTGGTGCAAC GCTTTGGCCT CAAAGCCAGC 
GCCGCAACGG TTCGTTCGGC AATGGGAGCC CTTGAACAGC GTGGCCTGCT CACCCAACCT 
CATACCTCGG CGGGAAGAGT GCCGAGCCCG CAGGGCTATC GCCACTATGT GGACTGCTTG 
CTGCCGCCTC CTGGATCGGC GGCGCAGCAC CTGGAACGGG AACTGACAAA CCTCAGTCTG 
CGCTGGGCAG CTCTCGATGA CTTGATGTGG CAATTGGCCC GTCGCCTCAC CGATTTCACC 
GGCCTCATGA GCTTGATTAC CAGGCCAGCA CGGCCAAAGC CAACGCTTCA AGCCGTACGC 
CTGGTGCGCA GTGGCGACCG GCTGCTGGTG ATGCTGGTGG AAAGCTCCAA CCAAGCAAGT 
CATCTCAATC TGCGGCTGCC CCATGAAGCC AGCAACGAAC TCGAAGCCAT CGAGGAGTGG 
ACCCGCGATC AACTGGCCAC AACGGGAAAC GGCAGCCTCG ACTGGTCGAG CCTGCCACCG 
CAGCTCAATC TGAGCGGATC TTTACTGCGA GAGGCGATTC ACAGCCACAG CCAAGCTCAA 
ACACCGGCTG AATCAGATGC AGTGTTCCAT GGGATGTCAA GGCTGCTTGC GCAGCCAGAA 
TTCAGCAGTA GCGCCAGCCT CCAACCTTTA CTTGAACTGA TGGATACGCA GCCAGCTGCA 
GTGGTGCCAG TGGGCAGTGA GCAACTGGGA GGCGTGTGGA TCGGCGCAGA GCACCCCAAG 
AGCGCCCTGG AAGCCTGTTC CGTGGTGCAA GCGACCTATC ACAGCTCCGG GGAAGGCATC 
GGACAGGTTG CTCTCGTTGG CCCGATGCGC ATGGCTTATG CCACAGCCAA GGCAGCCGTG 
AGCAGCGTGG CGAATCACCT TGAAAGGTTG CTCTGCTAA 

 

Protein sequence

MTEHKRRATP PYHQDPDVTA LESLPARQQQ VLQATVHHYV DTIEPVGSKT LVQRFGLKAS 
AATVRSAMGA LEQRGLLTQP HTSAGRVPSP QGYRHYVDCL LPPPGSAAQH LERELTNLSL 
RWAALDDLMW QLARRLTDFT GLMSLITRPA RPKPTLQAVR LVRSGDRLLV MLVESSNQAS 
HLNLRLPHEA SNELEAIEEW TRDQLATTGN GSLDWSSLPP QLNLSGSLLR EAIHSHSQAQ 
TPAESDAVFH GMSRLLAQPE FSSSASLQPL LELMDTQPAA VVPVGSEQLG GVWIGAEHPK 
SALEACSVVQ ATYHSSGEGI GQVALVGPMR MAYATAKAAV SSVANHLERL LC