Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_26701 |
Symbol | ndhF |
ID | 4777534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 2356233 |
End bp | 2358245 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640088193 |
Product | NAD(P)H-quinone oxidoreductase subunit F |
Protein accession | YP_001018665 |
Protein GI | 124024358 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCGG CCGCCGACCT CGCCTGGTTA ATCCCGGTGT TCCCCCTACT CGGAGCGATC GCCACAGGCC TGGGACTAAT CAGTTTCAAC CGCACCATTA ACCGCCTGCG TAAGCCGGTA GCTGTACTGC TGCTCACCTC TCTAGGTGCT GCCGCCGTCT TGAGCTATGC AGTCCTCGCC GAGCAGCTGG CCGGTGCTGC ACCTGTCGAA CATCTCTTCG TCTGGGCCAG CGCCGGCAGT TTCATTCTGC CAATGGGTTA TGTGATTGAT CCCCTTGGAG CCGTAATGCT TGCCCTGGTC ACCACCATCG CTCTGCTGGT GATGATCTAC TCCCATGGCT ACATGGCCCA CGACAAGGGC TACGTGCGTT TCTTTACCTA TCTAGCCCTA TTCAGCAGCT CGATGCTGGG CTTGATCATC AGCCCAAACC TTCTCGAAAT CTACGTGTTT TGGGAGCTGG TAGGGATGTG CTCCTATCTC CTGGTGGGCT TCTGGTATGA CCGGGATGGT GCCGCCCATG CAGCTCAAAA GGCTTTTGTC GTCAACCGTG TGGGTGATTT TGGCTTGCTC CTGGGCATTC TCGGACTCTT CTGGGCAACG GGCAGTTTTG ATTTCCATGG CATCGCCAAT GGCTTGTCAG ATGCCATCGA GAGCGGCACC GTTCCAGGCT GGGCGGCATT GACCTTATGT CTGTTGGTGT TCATGGGTCC GATGGCCAAG TCAGCTCAAT TCCCCCTTCA TGTTTGGCTT CCCGATGCCA TGGAAGGGCC CACACCAATT TCTGCTCTCA TCCATGCGGC AACCATGGTG GCAGCCGGTG TCTTCCTCGT TGCCAGGCTC GAACCTCTCT ACAGCCAGTT CCCCATGGTG GGTTTGGTGA TCGCCGTGAT CGGCACGATC ACCTGTTTTC TGGGAGCGTC CATCGCGCTC ACCCAAATGG ACCTCAAGAA GGGACTGGCT TACAGCACGG TGTCTCAACT TGGATACATG ATGCTGGCGA TGGGCTGCGG CGCTCCCGTA GCAGGAATGT TCCACCTGGT GACCCATGCC TTTTTCAAGG CCATGCTTTT CCTTGGCTCA GGTTCAGTGA TCCACGCCAT GGAAGACGTT GTTGGTCACG AACCCATCCT GGCCCAAGAC ATGCGACTGA TGGGCGGCCT GCGCCAAAAA ATGCCGATCA CCGCCATCAC CTTCCTGATC GGCTGCATTG CCATCAGCGG TATTCCCCCT CTAGCAGGCT TCTGGAGCAA AGACGAAATT CTGGGACAAG CATTCACGAC CTTCCCCTTG CTCTGGGTTG TGGGTTTTCT GACAGCAGGG ATGACAGCCT TCTACATGTT CCGCCTCTAC TTCCTCACAT TTGAAGGGCC ATTCCGCGGA GAAGACAAAA CCCTTCAGGC AAACCTGCTT GCTGCTGCGG GCAAAGGCAG TGAAGACGAG CATCCTCATC AAGGCGGTGT ACTACATGAG TCGCCCTGGT CCATGACTCT GCCATTAGCA CTCTTGGCAA TGCCCTCGAT GCTGATTGGT CTACTCGGCA CCCCCTGGAA CAGCCGCTTT GCAGGCCTGC TCAACCCAGA GGAGGCTCTT GAAATGGCCG CAACATTCAA CTGGAGTGAA TTCCTGCCAC TGGCAGGAGC TTCAGTGGCG ATCTCAACAG CAGGCATCAG CTTGGCTGTC TTGGCTTATG CACTGCACCG CCTCAATCTC GAAGAACTAT TTGCCAATCG CTTCCCTGTC ATCAATACCT TCCTGGCCAA CAAGTGGTAT TTGGATGACA TCAATGAAAA GATCTTCGTA CGCGGCAGCC GCAAACTGGC TCGTGAAGTG CTTGAAGTGG ATGCCAAGGT GGTTGACGGC GTAGTGAATC TCACCGGCCT ACTCACGCTT GGAAGTGGCG AAGGTCTTAA GTACTTTGAA ACAGGCCGCG CTCAGTTTTA CGCCCTCATC GTTTTCGGTG GTGTCATCGC CTTGGTAGTT CTATTCGGCG TCCTAGGCAG TCCTGTGAGC TGA
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Protein sequence | MTSAADLAWL IPVFPLLGAI ATGLGLISFN RTINRLRKPV AVLLLTSLGA AAVLSYAVLA EQLAGAAPVE HLFVWASAGS FILPMGYVID PLGAVMLALV TTIALLVMIY SHGYMAHDKG YVRFFTYLAL FSSSMLGLII SPNLLEIYVF WELVGMCSYL LVGFWYDRDG AAHAAQKAFV VNRVGDFGLL LGILGLFWAT GSFDFHGIAN GLSDAIESGT VPGWAALTLC LLVFMGPMAK SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGVFLVARL EPLYSQFPMV GLVIAVIGTI TCFLGASIAL TQMDLKKGLA YSTVSQLGYM MLAMGCGAPV AGMFHLVTHA FFKAMLFLGS GSVIHAMEDV VGHEPILAQD MRLMGGLRQK MPITAITFLI GCIAISGIPP LAGFWSKDEI LGQAFTTFPL LWVVGFLTAG MTAFYMFRLY FLTFEGPFRG EDKTLQANLL AAAGKGSEDE HPHQGGVLHE SPWSMTLPLA LLAMPSMLIG LLGTPWNSRF AGLLNPEEAL EMAATFNWSE FLPLAGASVA ISTAGISLAV LAYALHRLNL EELFANRFPV INTFLANKWY LDDINEKIFV RGSRKLAREV LEVDAKVVDG VVNLTGLLTL GSGEGLKYFE TGRAQFYALI VFGGVIALVV LFGVLGSPVS
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