Gene P9303_26701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_26701 
SymbolndhF 
ID4777534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp2356233 
End bp2358245 
Gene Length2013 bp 
Protein Length670 aa 
Translation table11 
GC content56% 
IMG OID640088193 
ProductNAD(P)H-quinone oxidoreductase subunit F 
Protein accessionYP_001018665 
Protein GI124024358 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGG CCGCCGACCT CGCCTGGTTA ATCCCGGTGT TCCCCCTACT CGGAGCGATC 
GCCACAGGCC TGGGACTAAT CAGTTTCAAC CGCACCATTA ACCGCCTGCG TAAGCCGGTA
GCTGTACTGC TGCTCACCTC TCTAGGTGCT GCCGCCGTCT TGAGCTATGC AGTCCTCGCC
GAGCAGCTGG CCGGTGCTGC ACCTGTCGAA CATCTCTTCG TCTGGGCCAG CGCCGGCAGT
TTCATTCTGC CAATGGGTTA TGTGATTGAT CCCCTTGGAG CCGTAATGCT TGCCCTGGTC
ACCACCATCG CTCTGCTGGT GATGATCTAC TCCCATGGCT ACATGGCCCA CGACAAGGGC
TACGTGCGTT TCTTTACCTA TCTAGCCCTA TTCAGCAGCT CGATGCTGGG CTTGATCATC
AGCCCAAACC TTCTCGAAAT CTACGTGTTT TGGGAGCTGG TAGGGATGTG CTCCTATCTC
CTGGTGGGCT TCTGGTATGA CCGGGATGGT GCCGCCCATG CAGCTCAAAA GGCTTTTGTC
GTCAACCGTG TGGGTGATTT TGGCTTGCTC CTGGGCATTC TCGGACTCTT CTGGGCAACG
GGCAGTTTTG ATTTCCATGG CATCGCCAAT GGCTTGTCAG ATGCCATCGA GAGCGGCACC
GTTCCAGGCT GGGCGGCATT GACCTTATGT CTGTTGGTGT TCATGGGTCC GATGGCCAAG
TCAGCTCAAT TCCCCCTTCA TGTTTGGCTT CCCGATGCCA TGGAAGGGCC CACACCAATT
TCTGCTCTCA TCCATGCGGC AACCATGGTG GCAGCCGGTG TCTTCCTCGT TGCCAGGCTC
GAACCTCTCT ACAGCCAGTT CCCCATGGTG GGTTTGGTGA TCGCCGTGAT CGGCACGATC
ACCTGTTTTC TGGGAGCGTC CATCGCGCTC ACCCAAATGG ACCTCAAGAA GGGACTGGCT
TACAGCACGG TGTCTCAACT TGGATACATG ATGCTGGCGA TGGGCTGCGG CGCTCCCGTA
GCAGGAATGT TCCACCTGGT GACCCATGCC TTTTTCAAGG CCATGCTTTT CCTTGGCTCA
GGTTCAGTGA TCCACGCCAT GGAAGACGTT GTTGGTCACG AACCCATCCT GGCCCAAGAC
ATGCGACTGA TGGGCGGCCT GCGCCAAAAA ATGCCGATCA CCGCCATCAC CTTCCTGATC
GGCTGCATTG CCATCAGCGG TATTCCCCCT CTAGCAGGCT TCTGGAGCAA AGACGAAATT
CTGGGACAAG CATTCACGAC CTTCCCCTTG CTCTGGGTTG TGGGTTTTCT GACAGCAGGG
ATGACAGCCT TCTACATGTT CCGCCTCTAC TTCCTCACAT TTGAAGGGCC ATTCCGCGGA
GAAGACAAAA CCCTTCAGGC AAACCTGCTT GCTGCTGCGG GCAAAGGCAG TGAAGACGAG
CATCCTCATC AAGGCGGTGT ACTACATGAG TCGCCCTGGT CCATGACTCT GCCATTAGCA
CTCTTGGCAA TGCCCTCGAT GCTGATTGGT CTACTCGGCA CCCCCTGGAA CAGCCGCTTT
GCAGGCCTGC TCAACCCAGA GGAGGCTCTT GAAATGGCCG CAACATTCAA CTGGAGTGAA
TTCCTGCCAC TGGCAGGAGC TTCAGTGGCG ATCTCAACAG CAGGCATCAG CTTGGCTGTC
TTGGCTTATG CACTGCACCG CCTCAATCTC GAAGAACTAT TTGCCAATCG CTTCCCTGTC
ATCAATACCT TCCTGGCCAA CAAGTGGTAT TTGGATGACA TCAATGAAAA GATCTTCGTA
CGCGGCAGCC GCAAACTGGC TCGTGAAGTG CTTGAAGTGG ATGCCAAGGT GGTTGACGGC
GTAGTGAATC TCACCGGCCT ACTCACGCTT GGAAGTGGCG AAGGTCTTAA GTACTTTGAA
ACAGGCCGCG CTCAGTTTTA CGCCCTCATC GTTTTCGGTG GTGTCATCGC CTTGGTAGTT
CTATTCGGCG TCCTAGGCAG TCCTGTGAGC TGA
 
Protein sequence
MTSAADLAWL IPVFPLLGAI ATGLGLISFN RTINRLRKPV AVLLLTSLGA AAVLSYAVLA 
EQLAGAAPVE HLFVWASAGS FILPMGYVID PLGAVMLALV TTIALLVMIY SHGYMAHDKG
YVRFFTYLAL FSSSMLGLII SPNLLEIYVF WELVGMCSYL LVGFWYDRDG AAHAAQKAFV
VNRVGDFGLL LGILGLFWAT GSFDFHGIAN GLSDAIESGT VPGWAALTLC LLVFMGPMAK
SAQFPLHVWL PDAMEGPTPI SALIHAATMV AAGVFLVARL EPLYSQFPMV GLVIAVIGTI
TCFLGASIAL TQMDLKKGLA YSTVSQLGYM MLAMGCGAPV AGMFHLVTHA FFKAMLFLGS
GSVIHAMEDV VGHEPILAQD MRLMGGLRQK MPITAITFLI GCIAISGIPP LAGFWSKDEI
LGQAFTTFPL LWVVGFLTAG MTAFYMFRLY FLTFEGPFRG EDKTLQANLL AAAGKGSEDE
HPHQGGVLHE SPWSMTLPLA LLAMPSMLIG LLGTPWNSRF AGLLNPEEAL EMAATFNWSE
FLPLAGASVA ISTAGISLAV LAYALHRLNL EELFANRFPV INTFLANKWY LDDINEKIFV
RGSRKLAREV LEVDAKVVDG VVNLTGLLTL GSGEGLKYFE TGRAQFYALI VFGGVIALVV
LFGVLGSPVS