| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_26421 |
|---|
| Symbol | |
|---|
| ID | 4776500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 2332374 |
|---|
| End bp | 2333369 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640088164 |
|---|
| Product | Pectate lyase |
|---|
| Protein accession | YP_001018637 |
|---|
| Protein GI | 124024330 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.625545 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACTC CCCTTCCGTC GAATTCCCAG GCTCAGCGAG ATGCTGGTGA TTATCTTCGC
GAGAGCTTGG TTAGACAAAA GCTTGTGCAA CGTATTTGTG GCCAGGCTGT TATCTATTTT
GGGGCATTTA TTGTTGCAGT TTCGCTGTAT AAATTTGTCA GCGCTTTCTC GTTAGATGTC
TCTCCTTGGC CTGAGCTGCA GCTTGGAGTC GCTGGCCTGT TGTTAGCTTT TTTAGGTAAT
TTTCTGCGAC GCTCAACCTT TTTAAAGTCT TTGCTTTCGG AGTTTAGTCC TTCGGCTAGA
GCAAGTAGAT CTCTATTGAT GTTGATCCTT GCATTATTTA TTATGGGATC TGTAGTTCTA
TTCAAGCTGT CAGTTCAGGA TGTTTTGCGT TACAAACGGC TGCTTGGAGA AGGAGGAATT
CTTGAGTACT TGCAGGCTCT AATTCTGTTC ACTTCTGCCT GGGTCTCTTG GCTGATTTCT
AGGGACTTAT GGAGGCGTCT GTTGATGCGC TTGCATGGAG CCATTTATGG GATTATTGCT
TTGGGAATGC TTTTTGTTGG CTTAGAGGAG CTTGCTTGGG GTCAGGTTTT GTTTGGCTGG
AGAACACCTG ATAATATAGC GGCTCTCAAT GCTCAAAATC AGACAACGAT TCATAACCTC
GAGTTTTTTC AAGATTATCT TGATATGAAT CTTTTTCTGG TGTCAGCATT GATTCTAGTT
TTGGTGTTAT GGCGGCCATC TTTTGGATTG TTTAAAGCAA GATCATCTCG AGAGGATGTA
ATTCCTGTTG GAACATTTTT TCTGCCCAGG TATTTCTGGC CTCTATTCTT TTGTGCTGCG
TTTTTGTCTT ATTTTGTTGC TACCAGGTCA GCGACAGCTT TGGTTCTGAA TATTGATCAG
GAGTGGGCAG AGTTGATGCT TTATCTCTCC TTCGGTCTAG GGTTGCTGCG AACCTATGTC
TTGCTAGCAA ATCCTTCAGG GCGCCAAAAT GGTTGA
|
|---|
| Protein sequence | MSTPLPSNSQ AQRDAGDYLR ESLVRQKLVQ RICGQAVIYF GAFIVAVSLY KFVSAFSLDV
SPWPELQLGV AGLLLAFLGN FLRRSTFLKS LLSEFSPSAR ASRSLLMLIL ALFIMGSVVL
FKLSVQDVLR YKRLLGEGGI LEYLQALILF TSAWVSWLIS RDLWRRLLMR LHGAIYGIIA
LGMLFVGLEE LAWGQVLFGW RTPDNIAALN AQNQTTIHNL EFFQDYLDMN LFLVSALILV
LVLWRPSFGL FKARSSREDV IPVGTFFLPR YFWPLFFCAA FLSYFVATRS ATALVLNIDQ
EWAELMLYLS FGLGLLRTYV LLANPSGRQN G
|
|---|
| |