Gene P9303_25761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_25761 
Symbolicd 
ID4777268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp2268900 
End bp2270324 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content57% 
IMG OID640088097 
Productisocitrate dehydrogenase 
Protein accessionYP_001018572 
Protein GI124024265 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGT TCGAGAAGCT CTCCGCCCCA AGCCAGGGCA CGGCCATCCG CTTCGTGAAC 
GGTCAGCCAG TCATACCCAA CGAGCCAATC ATTCCCTTCA TCCGCGGTGA TGGCACAGGT
GTGGACATCT GGCCGGCAAC CCAACGAGTG CTGGATGCAG CTGTAACAAA GGCCTATCAA
GGCGTGCGTC GTATCGAATG GTTCAAGGTC TATGCAGGCG ACGAGGCCTG CGATCTCTAC
GGCACCTACC AGTACCTACC AGAAGACACC CTGGAAGCGA TCCGCACCTA TGGGGTCGCC
ATCAAAGGTC CCCTCACGAC TCCAATCGGT GGCGGCATCC GTTCCCTCAA TGTGGCCCTA
CGTCAAATCT TCGATTTGTA TTCCTGCGTC CGCCCATGTC GCTACTACAA GGGCACACCC
AGTCCCCACA AACGGCCTCA GGATCTTGAT GTCATCGTCT ACCGAGAAAA CACGGAAGAT
ATCTACATGG GGGTGGAATG GGAAGCCGAT GATCCAGTCG GCCAGACATT GCGCGAACAT
CTCAACACTG TCGTCATTCC CGCCAACGGC AAGCTCGGCA AACGCCAGAT TCCTGAAGGC
TCAGGCATCG GCATCAAGCC GGTAAGCAAG CACGGCAGCC AGCGTCATAT CCGCAAAGCG
ATTCAACATG CTCTTCGGCT AAAGGGCGAC AAGCGCCACG TCACCTTGGT GCACAAAGGC
AACATCATGA AGTTCACGGA AGGAGCCTTC CGTGACTGGG GCTATGAACT CGCCACAAGC
GAGTTCCGCG ACGTGTGCAT CACCGAAAGG GAGAGCTGGA TTCTCGGCAA TCTTGAAAAC
GATCCACAAC TAAGCATCCA AGCCAATGCC CGCATGATCG AGCCTGGCTA CGACAACCTC
ACGCCTGAGA GAAAGGCCAG CATCGATGCC GAAGTGCACG GCGTGCTGGA TGCCATCGGC
ACCAGCCATG GCAACGGCCA ATGGAAAGCG ATGGTGCTTG TCGATGACCG CATCGCCGAC
AGCATCTTCC AACAGATCCA AACGCGGCCG CAGGAATACT CAATCCTGGC AACACTCAAC
CTCAATGGCG ACTACATCTC CGATGCAGCC GCGGCGATGG TGGGCGGATT AGGCATGGCC
CCGGGAGCCA ACATCGGCGA GAACGCGGCC ATCTTCGAGG CCACTCACGG CACGGCACCC
AAGCATGCCG GCCTTGATCG CATCAACCCT GGATCGGTGA TCCTCAGCGG CGTAATGATG
CTGGAGTTTC TGGGCTGGCA AGAAGCCGCA GACTTGATCA CAAAAGGGCT CAGTGCTGCG
ATTGCCAATC AACAGGTCAC CTATGACCTT GCTCGCCTAA TGGACCCGCC CGTAGAACCT
GTGAGCTGCA GTGGCTTCTC TGAAGCCGTC ATCAGCCACT TCTAA
 
Protein sequence
MAQFEKLSAP SQGTAIRFVN GQPVIPNEPI IPFIRGDGTG VDIWPATQRV LDAAVTKAYQ 
GVRRIEWFKV YAGDEACDLY GTYQYLPEDT LEAIRTYGVA IKGPLTTPIG GGIRSLNVAL
RQIFDLYSCV RPCRYYKGTP SPHKRPQDLD VIVYRENTED IYMGVEWEAD DPVGQTLREH
LNTVVIPANG KLGKRQIPEG SGIGIKPVSK HGSQRHIRKA IQHALRLKGD KRHVTLVHKG
NIMKFTEGAF RDWGYELATS EFRDVCITER ESWILGNLEN DPQLSIQANA RMIEPGYDNL
TPERKASIDA EVHGVLDAIG TSHGNGQWKA MVLVDDRIAD SIFQQIQTRP QEYSILATLN
LNGDYISDAA AAMVGGLGMA PGANIGENAA IFEATHGTAP KHAGLDRINP GSVILSGVMM
LEFLGWQEAA DLITKGLSAA IANQQVTYDL ARLMDPPVEP VSCSGFSEAV ISHF