| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_25481 |
|---|
| Symbol | |
|---|
| ID | 4778768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 2241365 |
|---|
| End bp | 2242894 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640088069 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001018544 |
|---|
| Protein GI | 124024237 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5305] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTCT GGCGGCGCTT TGGGCTGGGA GTAGTGGTCA TCCTGGTCTG TGTGGCATTT
GCCTTAAAGG CTCTTTTGTT GGTGGATGTC ACCAGCTTGT GGAGTGATGA GCTTTACAGC
GTTGGTAAGA GTTTTCAGCC GAGTTTCAGG GATCTGTTGG CAATGCTCCG CAATGACACC
CATCCGCCTG TTTATTACAG CCTGCTCTGG TTCTGGGGTC AGAGCGTTGG TCAGAACGCT
GTGACGTTGC GATTGCTTTC CTGGCTGGCC TATGGGCTTG GTGGAATCGT GATGGTGTTT
CAGGCAGGAG CCTTGGCTCA GGCGCGAGGG GTGTCGCGGG GTCGGAGTTT GTGCCTTGCG
GCATTGCTGG CTTTTTGCAG TCCGTATCCG GTGCGTTTTG CGATCGAAGG CAAGAGTTAT
GCCCTTTTGG TGTTGTTTGT GGGACTTGCT TGGTGGTGGC GGCGTCGGCT TTTGCAGTCA
GTGGAATCAA GCACTGTTTT TGCAAGAGAT CTTCTGTTGT ATGGCATCAC GGTTTGCCTT
GCAGCACTCA CCCATTTCTA TGGCCTTTTT TTATTTGCGG TGGCGGCGGC TTGGGATCTA
TGGCAGCAGC GCTGGCGGCT GGGTGGCATA GCCACACTGG CTTTGCTTCC TGCTTTGGTT
TGGATTGCTT ACGCGGCTGC TTATCTTTTT CGTGATTCCA CGGGTGGCTG GTTGGCTCAG
CCAGGTTTCG CTCTGCTTGA GGAGACCTTG GCAAGGGCCC TTGGTCCTTG GCCCTTCCCG
AAAATTGGCT TGTTTGTCTT GCTGATGCTG GCTTTGCGAC GATGGGGTCG ACTGTCTGCT
GGTCATGATG ATGATGAAGG CCATAGAAGG GATTTACAGC CAGCTGTAGT TGCTGGTTCT
CTTGTGGATC AGAGCGGTTT GATTCCATCC GCGTTGATGC TTCTGGCAGT AGTGGCCGTG
TCGTTTGTGA AGCCGTTGGC TTTTAGCCGC TACTTCGTGG TGCTGGTGCC GGCGGCTCTG
CCTTTGATTG CGGTGAAGTT GGGGGGGCTT CGACTCAACC TCCGAGGTAG TGCCTTAGCG
CTTGTCGCTT TGACGGCCCT AACTGTTTTG TGGTGGCAGC AGAGTTATAT AGGGCTTCAC
CCTGGGCTCG GCAGTGCCGG TGGTAGGGAA CAAGACAATT TCCGTGCGAT TAGCCAATCA
CTAGCCGGCC AAGTGGAGCG CTATGGACGG CGGTCGAGGC TACTTAATTT GAGTGATCAT
ATGGAAGTTG CCGCGGGTCG GATGCTTAGC AATTCAATGC CTTGGGGTGA TGGTGCTGCG
CTGCAGAAAC GACTCGATCA ACCACCTTTG CCATCGGTTA TCTGGCTTGC GAGTAGTGGT
CCTGACCAAT CAATGCGTCG TCGGCTCAAG CCTCTGATCA AGAGAGCTGA ACAAGGTGGG
TATACATGTC GGGAGGATGG CCCACAGATT GAGTACACGC GCGTGTTGCG TTGCACGCTG
ATGACGTCCA GTGTCGGTGA CTCTCAGTAG
|
|---|
| Protein sequence | MLFWRRFGLG VVVILVCVAF ALKALLLVDV TSLWSDELYS VGKSFQPSFR DLLAMLRNDT
HPPVYYSLLW FWGQSVGQNA VTLRLLSWLA YGLGGIVMVF QAGALAQARG VSRGRSLCLA
ALLAFCSPYP VRFAIEGKSY ALLVLFVGLA WWWRRRLLQS VESSTVFARD LLLYGITVCL
AALTHFYGLF LFAVAAAWDL WQQRWRLGGI ATLALLPALV WIAYAAAYLF RDSTGGWLAQ
PGFALLEETL ARALGPWPFP KIGLFVLLML ALRRWGRLSA GHDDDEGHRR DLQPAVVAGS
LVDQSGLIPS ALMLLAVVAV SFVKPLAFSR YFVVLVPAAL PLIAVKLGGL RLNLRGSALA
LVALTALTVL WWQQSYIGLH PGLGSAGGRE QDNFRAISQS LAGQVERYGR RSRLLNLSDH
MEVAAGRMLS NSMPWGDGAA LQKRLDQPPL PSVIWLASSG PDQSMRRRLK PLIKRAEQGG
YTCREDGPQI EYTRVLRCTL MTSSVGDSQ
|
|---|
| |