Gene P9303_24901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_24901 
Symboltgt 
ID4776976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp2187593 
End bp2188711 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content55% 
IMG OID640088011 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_001018486 
Protein GI124024179 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGATT TTCAGATCAA CGCCCACTGT TCACACACAC GTGCTCGCGT TGGCTGCTTC 
CGCACTCCTC ATGGTTCTGT CAACACACCT CGTTTCATGC CTGTGGGCAC GCTGGCAACG
GTGAAAGGCA TCACAGCCAC TCAACTGGCC GACACCGGAG CCCAGATGGT GTTAGCCAAC
ACCTATCACC TCCATCTTCA GCCAGGCGAG GGGATCGTGG CAGATGCCGG TGGCCTGCAT
CGCTTCATGG GCTGGGACCG CCCACTGCTT ACCGACTCAG GTGGCTTTCA GATTTTCAGC
CTGGCAGACC TGAATCGTAT TGATGATCAC GGGGTCGTTT TTCGCAACCC TCGTAATGGC
AGCCAGATTG AACTCACGCC AGAACGCGCC ATCGAAATAC AAATGGCCCT TGGCGCTGAT
GTCGCTATGG CCTTCGACCA ATGCCCCCCA TACCCAGCCA GCGAAAGCGA TGTGGAGGCT
GCCTGTAAGC GCACCCATGC ATGGCTGGAA CGCTGCTCGA ACACCCATCA ACTCACAAAT
CAAGCCCTAT TCGGCATTGT TCAGGGAGGA TGTTTTCCCC ACCTCAGAGA GCAAAGTGCT
CAAATCGTGG CCAGCTTTGA TTTGCCTGGC ATCGCCATCG GTGGCGTCAG CGTGGGTGAA
CCGGTTGAAG ACATTCATCG CATCGTGCGC CAGGTTTCTC CTCTGCTTCC CCAGGATCGC
CCCCGCTATC TGATGGGGAT TGGCACCCTG CGAGAAATAG CGATTGCAGT TGCAAGCGGT
ATCGATCTAT TCGACTGTGT GCTGCCTACT CGCCTGGGAA GACATGGCAC AGCACTTGTC
GCTGGCGAGC GCTGGAATTT ACGCAATGCC CGCTTTCGTG AAGATCACAC ACCCCTAGAT
CAAAGCTGTA CCTGTACAGC CTGCCGCCAT CACAGCCGGG CTTATCTGCA TCACTTAATT
CGCAACGAGG AGCTCCTAGG GCTCACGCTT CTAAGCCTGC ACAACCTCAC CCAGCTGATC
AGATTCACCT CAGCTATTAG CCAGGCAATT CAAGATGACT GTTTTTCAGA GGATTTCGCT
CCTTGGCAAC CTGACTCAGC AGCACATCAC ACGTGGTAA
 
Protein sequence
MFDFQINAHC SHTRARVGCF RTPHGSVNTP RFMPVGTLAT VKGITATQLA DTGAQMVLAN 
TYHLHLQPGE GIVADAGGLH RFMGWDRPLL TDSGGFQIFS LADLNRIDDH GVVFRNPRNG
SQIELTPERA IEIQMALGAD VAMAFDQCPP YPASESDVEA ACKRTHAWLE RCSNTHQLTN
QALFGIVQGG CFPHLREQSA QIVASFDLPG IAIGGVSVGE PVEDIHRIVR QVSPLLPQDR
PRYLMGIGTL REIAIAVASG IDLFDCVLPT RLGRHGTALV AGERWNLRNA RFREDHTPLD
QSCTCTACRH HSRAYLHHLI RNEELLGLTL LSLHNLTQLI RFTSAISQAI QDDCFSEDFA
PWQPDSAAHH TW