| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_23851 |
|---|
| Symbol | psbO |
|---|
| ID | 4776429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 2102800 |
|---|
| End bp | 2103639 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640087905 |
|---|
| Product | photosystem II manganese-stabilizing protein |
|---|
| Protein accession | YP_001018383 |
|---|
| Protein GI | 124024076 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.113979 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTTC GTCCTTTGCT GGCCCTGGTG CTGGCTTTCT GTCTCACCTT TGTAGCTGCC
CCAAGCAGTG TGTCCGCCGC AATCACAGAT GGCGCGGGCA ATAGCGATTT CGTTGTTGGC
AATGAACGCT CTAATGCACG TTTTGGCAAC ATCGTTAATA CCGGTAGAGC AAACGATTGC
CCAACCATCG CCGCTGGTTC AAGTGGATCC ATCAGCATTG GTTCTGGCGA TACTCTCAGC
GACATTTGCT TGCAACCCAC TGAGGTGTTT GTGAAGGTTT CGCCTACAAA GCGCAAAAAA
GCTGATTTCG CTAAAACTAA GATCATCAGC CCATCCAATA ACACCACTAT TGAGCAGGTT
TTCGGAGACA TTTCTGGTTC TGGAGCCTTC GCTGAAAAGG GTGGTATTGA CTTTCAATTA
ATTACCGTCC TCGCACCTAA TGGTGAGGAA GTGCCTTTTG TCTTCTCAGC TAAAGACATG
CAGGTGGATT CAAACAGTTC TTCAATCTCG GTTGGTACTG AGTTCAAAGG CACAACAAGG
ACACCTAGCT ATCGCACCAG CAACTTCCTT GATCCCAAAA GTCGTGCTTT GACTACAGGT
GTTGACTATG CCCAAGGCCT CGTTGCATTG GGTGGTGATG ACAAGGATCT TCAGACTGAA
AATGTCAAGC GCTATATCGA TGGCAAGGGT CAAATCACCC TCTCTGTCGA TAGTGTTGAC
GCTGGCTCCA ATGAATTTGC TGGCACCTTC GTCGCATTAC AGACTGCTGA TACAGACATG
GGTTCTAAGG AAGCTCGTGA TCTCAAGATC TCTGGGGTCC TCTATGGCCG TAAGGGCTGA
|
|---|
| Protein sequence | MLFRPLLALV LAFCLTFVAA PSSVSAAITD GAGNSDFVVG NERSNARFGN IVNTGRANDC
PTIAAGSSGS ISIGSGDTLS DICLQPTEVF VKVSPTKRKK ADFAKTKIIS PSNNTTIEQV
FGDISGSGAF AEKGGIDFQL ITVLAPNGEE VPFVFSAKDM QVDSNSSSIS VGTEFKGTTR
TPSYRTSNFL DPKSRALTTG VDYAQGLVAL GGDDKDLQTE NVKRYIDGKG QITLSVDSVD
AGSNEFAGTF VALQTADTDM GSKEARDLKI SGVLYGRKG
|
|---|
| |