| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_23741 |
|---|
| Symbol | |
|---|
| ID | 4777199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 2092301 |
|---|
| End bp | 2093554 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640087894 |
|---|
| Product | L,L-diaminopimelate aminotransferase |
|---|
| Protein accession | YP_001018372 |
|---|
| Protein GI | 124024065 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.113284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCA AGACAGCCAG CTCATCAGTG GTTCAGGTCA ACAGCAACTA CCTCAAACTC
AAGGCGGGAT ATCTATTCCC CGAAATCGCC AGGCGGATCA AAAGCTTCAG TGAAGCCAAC
CCGGATGCTG CGCTCATCCG CCTCGGCATC GGCGATGTAA CCGAACCACT GCCACTGGCA
TGCAGAAACG CGATGAAGGT CGCCATCGAC GAGATGGGGA CCAACACTGG CTTCCATGGC
TATGGCCCTG AGCAGGGCTA CGACTGGCTG CGCGAAGCGA TCGCCAAGCA TGATTTCCAG
AACAAAGGCT GTCAGATCAA TGCCGAGGAG ATCTTTGTCT CCGACGGATC GAAGTGCGAC
AGCAGCAACA TCCTCGACAT CCTTGGGAGC AGCAATCGCA TCGCCGTTAC AGATCCAGTT
TATCCGGTGT ATGTCGACAG CAACGTGATG GCGGGTCGCA CCGGCGAGGC CAATCAAAGC
GGCCGCTACG CAGGCCTGAG CTACCTGCCA ATCAACGCCG AAAATGGGTT TGCAGCCAAG
ATCCCCTCCG AACCAGTCGA TCTGATCTAT CTGTGTTTCC CCAACAACCC CACCGGAGCG
GTAGCCACAA GAGCCCAGCT CCAGGAATGG GTGAACTATG CCCGCACCAA CAGCGTCTTG
ATTTTGTTTG ACGCTGCCTA TGAGGCGTTC ATCCAGAATC CCGACCTGCC CCATTCGATC
TATGAGATCG AGGGCGCGCG CGAGTGTGCC ATCGAATTCC GATCGTTCTC CAAGAATGCT
GGATTCACCG GCACCCGTTG CGCCTTCACG GTGGTACCGA AAGGCTTGAA GGGCAAAAGC
GACGATGGAT CAGATGTGGA ACTCTGGAAT CTCTGGAACA GGCGCCAAAG CACCAAGTTC
AACGGCGTCA GCTACATCAT TCAACGTGGC GCCGAAGCGG TTTACTCCGC CCAAGGCCAG
GGGGAGATCA ATGCGCTAGT GAGCTTCTAC ATGAGAAACG CCGCCATCAT CCGCAGGGAA
CTTACGGCCG CCGGGATCGA AGTGCATGGT GGTGAGCATG CGCCCTATGT GTGGCTGAAG
ACACCGGACG ACATGGATTC CTGGGGCTTC TTCGATCATC TGCTCCACAA CGCCAACGTG
GTAGGCACCC CAGGCAGCGG TTTCGGTGCT GCAGGCGAAG GCTACTTCCG TCTCTCCGCC
TTCAACAGTC GCGTCAATGT GGACGAGGCC ATGCGTCGGA TCCGTGCCCT CTGA
|
|---|
| Protein sequence | MPAKTASSSV VQVNSNYLKL KAGYLFPEIA RRIKSFSEAN PDAALIRLGI GDVTEPLPLA
CRNAMKVAID EMGTNTGFHG YGPEQGYDWL REAIAKHDFQ NKGCQINAEE IFVSDGSKCD
SSNILDILGS SNRIAVTDPV YPVYVDSNVM AGRTGEANQS GRYAGLSYLP INAENGFAAK
IPSEPVDLIY LCFPNNPTGA VATRAQLQEW VNYARTNSVL ILFDAAYEAF IQNPDLPHSI
YEIEGARECA IEFRSFSKNA GFTGTRCAFT VVPKGLKGKS DDGSDVELWN LWNRRQSTKF
NGVSYIIQRG AEAVYSAQGQ GEINALVSFY MRNAAIIRRE LTAAGIEVHG GEHAPYVWLK
TPDDMDSWGF FDHLLHNANV VGTPGSGFGA AGEGYFRLSA FNSRVNVDEA MRRIRAL
|
|---|
| |