| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_23261 |
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| Symbol | rpoA |
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| ID | 4777179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | + |
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| Start bp | 2046104 |
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| End bp | 2047042 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640087846 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001018326 |
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| Protein GI | 124024019 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGCAAT ACCAGATCGA CCGGATCGAG CATCAAGTTG CCGATGATCG CGCCCAAACA
GGCGTTTTCC TCATTGGACC GCTCGAACGC GGGCAAGCCA CCACGCTTGG CAATTCCCTC
CGCAGGGTGC TGATGGGGGG CCTTGAGGGG AGCGCCATCA CCGCCGTGCG CATTGCCGGT
GTCAACCACG AGTATGCGAC CATCCCAGGA GTCCGAGAAG ATGTACTCGA CATCCTGTTG
AACTGCAAAC AGCTGTCGGT AAACAGTCGA ACGAGTGAAC TAGAGATTGG GCGACTTGTG
GTTACCGGCC CTGCCCAGGT CAAAGCTAAA GACCTGCAAT TCTCCTCACA AGTCCAAGTG
GTGGATGGAG ACCGCCAAAT TGCCACTGTG CATGAGGGTC ACAGCCTTGA GTTAGAAGTT
CATGTTGAGC GGGGGATCGG TTACCGCCCT GTTGATCGCC ACAACGAAGA TATAAGCGCC
ATTGATCTAC TGCAGATCGA TGCTGTGTTC ATGCCCGTCC GTAGGGTGAA CTTCACCATC
GACGAGACTG CCGTCGCAGA AGGAGGATCT ACCCGTGAGA GGCTGCGCAT AGAAATTGTC
ACCGATGGTT CAACTACACC AGATGATGCC CTTGCAGAGT CAGCCAACCA ACTGATCGAA
CTCTTTCAGC CCCTTGCCAC CGTCACCATG GTGGAAGAAC CAGGCCTGGA ACCCGAGCCT
TCCGCTGAAT CACAGATCCC CCTTGAAGAG CTCAACCTCT CTGTAAGGGC TTACAACTGC
CTCAAGCGAG CCCAGGTGAA CTCAGTTTCT GACCTGATGG GCTTCAGCTA CGAGGACCTG
CTTGAGATCA AGAACTTCGG CTCTAAGTCT GCAGACGAGG TCATCGAAGC CCTAGAGCGC
ATCGGCATTT CAATTCCACA AAGCCGTACC AGCACCTAG
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| Protein sequence | MLQYQIDRIE HQVADDRAQT GVFLIGPLER GQATTLGNSL RRVLMGGLEG SAITAVRIAG
VNHEYATIPG VREDVLDILL NCKQLSVNSR TSELEIGRLV VTGPAQVKAK DLQFSSQVQV
VDGDRQIATV HEGHSLELEV HVERGIGYRP VDRHNEDISA IDLLQIDAVF MPVRRVNFTI
DETAVAEGGS TRERLRIEIV TDGSTTPDDA LAESANQLIE LFQPLATVTM VEEPGLEPEP
SAESQIPLEE LNLSVRAYNC LKRAQVNSVS DLMGFSYEDL LEIKNFGSKS ADEVIEALER
IGISIPQSRT ST
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