Gene P9303_23171 details

Gene Information

• Locus tag: P9303_23171
• Symbol: rplF
• ID: 4777846
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 2040896
• End bp: 2041435
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640087837
• Product: 50S ribosomal protein L6
• Protein accession: YP_001018317
• Protein GI: 124024010
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTCGTA TCGGTAAAAA TCCCATCCCC ATCCCCGACA AGGTGGCTGT AACCCTTGAT 
GGTCTTGCAG TCAGCGTCAA GGGCCCCAAG GGAGAACTGA ACCGCACCCT TCCAGAAGGC 
GTCAGCGTCA GTCAGGTGGA GAACACAATT GTGGTTACAC CCACTAGTCA GAAACGTAAG 
TCGCGTGAGC GTCACGGTCT CTGTCGCTCG CTTGTCGCCA ATATGGTTGA AGGGGTGAGC 
AAGGGCTACA CGCGCAAACT AGAACTCATC GGTGTGGGTT CACGTGCACA AGTGAAAGGC 
AAAAAGCTTG TCGTGAGTGC AGGTTTCAGC CACCCGGTGG AAATGGACCC TCCCGAGGGA 
ATCACCTTTG CTGTAGAGAA CAACACCAAC GTCACCGTCT CAGGTGCAGA CAAGGAACTG 
GTGGGCAATG AAGCTGCAAA GATCCGAGCC ATTCGTCCAC CTGAGCCCTA CAAAGGCAAG 
GGGATCAGAT ACGAAGGCGA ACGCATCCTG CGCAAAGCCG GCAAATCTGG CAAGAAATAG 

 

Protein sequence

MSRIGKNPIP IPDKVAVTLD GLAVSVKGPK GELNRTLPEG VSVSQVENTI VVTPTSQKRK 
SRERHGLCRS LVANMVEGVS KGYTRKLELI GVGSRAQVKG KKLVVSAGFS HPVEMDPPEG 
ITFAVENNTN VTVSGADKEL VGNEAAKIRA IRPPEPYKGK GIRYEGERIL RKAGKSGKK