Gene P9303_23151 details

Gene Information

• Locus tag: P9303_23151
• Symbol: rplE
• ID: 4776760
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 2039915
• End bp: 2040454
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640087835
• Product: 50S ribosomal protein L5
• Protein accession: YP_001018315
• Protein GI: 124024008
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0094] Ribosomal protein L5

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCACTCA AACAGCGCTA CCGGGAGACC ATTCAGCCCA AACTGCTGAA GGATCTAAGC 
CTCTCGAATA TTCACGAAGT CCCCAAGGTG CTAAAAATCA CCGTCAACCG AGGGCTCGGT 
GAGGCCGCCC AAAACGCAAA GTCCTTGGAG GCCTCAATTA CTGAACTGGC TACTATTACT 
GGCCAGAAAG TTGTCGTGAC TAGGGCCAAG AAGGCCATCG CTGGCTTCAA AATCAGGCAG 
GGAATGCCCA TAGGTTGCGC CGTCACACTC CGCGGAGAGC GGATGTATGC CTTCCTGGAG 
CGCCTGATCA ATCTTGCACT GCCCAGAATC CGGGACTTCC GAGGTGTCAG CCCAAAGAGT 
TTTGACGGCC GTGGAAACTA CACCCTTGGA GTGAGGGAGC AACTCATCTT CCCTGAAGTT 
TCCTTCGACA AGATCGATGC CATCAGGGGT ATGGACATCA CCATCGTGAC CAGCGCCCGT 
ACGGATGAAG AGGGCCAATC CCTCCTCCGA GAGATGGGAA TGCCGTTCCG CAGCAACTAA 

 

Protein sequence

MSLKQRYRET IQPKLLKDLS LSNIHEVPKV LKITVNRGLG EAAQNAKSLE ASITELATIT 
GQKVVVTRAK KAIAGFKIRQ GMPIGCAVTL RGERMYAFLE RLINLALPRI RDFRGVSPKS 
FDGRGNYTLG VREQLIFPEV SFDKIDAIRG MDITIVTSAR TDEEGQSLLR EMGMPFRSN