Gene P9303_22791 details

Gene Information

• Locus tag: P9303_22791
• Symbol: speD
• ID: 4778681
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 2014579
• End bp: 2015052
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640087798
• Product: S-adenosylmethionine decarboxylase proenzyme
• Protein accession: YP_001018279
• Protein GI: 124023972
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1586] S-adenosylmethionine decarboxylase
• TIGRFAM ID: [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.230834
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAGAGAA CCCTGTCTTG CTTGCATCCC AATCCAGGAT GGGAAGACAC CGATTGCCAA 
GACAACGCAA GCTCCATCAA TCACAGCGCC ACCGACATGG TGGGCAAGCA CTGCATCCTC 
GAGCTTTATG ACTGCGATCA CACCAAGCTC AATGACGAAG CCTTTCTGAG AACCACGATC 
ACAACAGCAG CGAAGCGTGC TGGTGCCACT CTTCTCAACC TCATCACTCA CAGATTTGAA 
CCTCAGGGGG TCACAGGGCT TGCCCTTCTA GCTGAATCGC ATCTCTCCAT CCACACATGG 
CCTGAGAATG GTTATGCGGC TGTTGATGTC TTCACTTGCG GCGATCAAAC GATGCCGGAA 
CGAGCTTGTG AGCTCTTACG CCAGGAACTT GGTGCCAAAA GCCATGCATT AAAGAGCTTC 
CAACGGGAAA CACCAGCAGC TCTAGCGACC GCAATACGCC ATCCAAAGGC TTAA 

 

Protein sequence

MERTLSCLHP NPGWEDTDCQ DNASSINHSA TDMVGKHCIL ELYDCDHTKL NDEAFLRTTI 
TTAAKRAGAT LLNLITHRFE PQGVTGLALL AESHLSIHTW PENGYAAVDV FTCGDQTMPE 
RACELLRQEL GAKSHALKSF QRETPAALAT AIRHPKA