Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_22631 |
Symbol | rnd |
ID | 4778470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 1998849 |
End bp | 1999487 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640087781 |
Product | putative ribonuclease D |
Protein accession | YP_001018263 |
Protein GI | 124023956 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.528712 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACT TTTCTAAAGC TCCTGCAAGC TTTGTCGTTT TCGATGGGGA TCTCGACTCA GACTGGGCGA ATCGATATCT CAGAGCATCT GCTATTGCGG TAGACACTGA GGCCATGGGA CTTATTCATG GCCGCGACCG CCTCTGTCTT GTGCAGATTT GTGACCCTGC CGACAATGTG GCATGCGTGC GGATCGGTTT GGGTCAGACC TCTGCCCCTC GCTTGCAGAA GCTAATGGAG GCCACTTCTG TTGAAAAGGT GTTCCACTTT GCTCGCTTTG ATGTGGCCGC ACTTGCTAGC GGATTGGGCA TCTCCGTTTT GCCCATTTTC TGTACGAAGG TGGCCAGTCG CCTTGCACGA ACCTATAGCC CTCGCCATGG GTTGAAGGAG GTGGTGATGG AGTTGGTTGG AGTTGAACTG GATAAGCAGG CCCAGAGCAG TGATTGGGGA AGGGTTGAGG AACTCAGCGA TGTTCAGTTG GCCTATGCAG CCAACGATGC TCGATATCTG CTTCCGGCTA GGCAACGTCT AGAAATGATG TTGCGACGTG AGGGGGCGCT GGGAGATTGC TCAGCGTTGT TTCAGCTGCA TTCCTGTCAT CGCGGAACTG GATCGTTTGC GATTTACCCA GATCTTTGA
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Protein sequence | MADFSKAPAS FVVFDGDLDS DWANRYLRAS AIAVDTEAMG LIHGRDRLCL VQICDPADNV ACVRIGLGQT SAPRLQKLME ATSVEKVFHF ARFDVAALAS GLGISVLPIF CTKVASRLAR TYSPRHGLKE VVMELVGVEL DKQAQSSDWG RVEELSDVQL AYAANDARYL LPARQRLEMM LRREGALGDC SALFQLHSCH RGTGSFAIYP DL
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