Gene P9303_21841 details

Gene Information

• Locus tag: P9303_21841
• Symbol: petD
• ID: 4777795
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: -
• Start bp: 1942436
• End bp: 1942918
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 640087699
• Product: cytochrome b6-f complex subunit IV
• Protein accession: YP_001018184
• Protein GI: 124023877
• COG category: [C] Energy production and conversion
• COG ID: [COG1290] Cytochrome b subunit of the bc complex
• TIGRFAM ID: [TIGR01156] cytochrome b6/f complex subunit IV

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.243247
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCACATTC TTAAGAAGCC CGATTTCTCT GATCCAAAAT TGAGAGCGAA ACTGGCCAAG 
GGCATGGGGC ACAACTACTA CGGTGAGCCT GCTTGGCCGA ATGATCTCCT TTACATCTTC 
CCAGTCGTGA TTCTGGGCAC GTTTGCTTGC CTTGTTGGTC TTGCTGTTCT TGATCCCGCG 
ATGTTGGGTG ATAAAGCAGA TCCCTTTGCA ACGCCTCTAG AGATTCTTCC TGAGTGGTAT 
CTCTATCCGG TGTTTCAGAT TCTTCGGGTT GTTCCTAATA AGCTGCTTGG CATCGTGTTG 
CAGACCCTTG TTCCTCTCGG GTTGATGCTG ATTCCCTTTA TCGAAAACGT TAATAAGTAT 
CAGAATCCAT TCCGCAGGCC AATTGCGATG GCCTTCTTTC TATTTGGAAC GATGATTACT 
ATTTATCTCG GCATCGGTGC TTGTCTTCCC ATCGACAAGT CCCTAACTCT GGGTTTGTTC 
TGA 

 

Protein sequence

MHILKKPDFS DPKLRAKLAK GMGHNYYGEP AWPNDLLYIF PVVILGTFAC LVGLAVLDPA 
MLGDKADPFA TPLEILPEWY LYPVFQILRV VPNKLLGIVL QTLVPLGLML IPFIENVNKY 
QNPFRRPIAM AFFLFGTMIT IYLGIGACLP IDKSLTLGLF