Gene P9303_21771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_21771 
Symbol 
ID4777612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp1933333 
End bp1933956 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID640087687 
Productputative sugar aldolase 
Protein accessionYP_001018177 
Protein GI124023870 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR03328] methylthioribulose-1-phosphate dehydratase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0878998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATT CACAGCAACA GCGGCAAGCT CTAAGCAACA CCATTCGCGA TTTCCATCAA 
CGCGGTTGGT GTGATGGAAC TGGCGGTAAT TTCAGCCTAG TGCTACAAAA AACGCCATTG
AGATTATTGA TGGCACCTAG CGGCATTGAG AAAAGAAATA TCGAGGCAGA CGAACTCATT
GAAGTCGACA GCTCAGGCAA CGTGATTCAA GGAGAAGGTA GAGCAAGTGC TGAAACAGAT
ATGCATTTAA AAATCATCGA GCAGACCAAC GCCAAGGCCG TACTGCACAC ACACTCAATG
ACAGCAACAT GGCTATCGAA CTACTATAAA AATACTGGGA AAATAACAAT TGAGGGCTGG
GAAATGCTGA AAGGGCTGAA AGGGATTAAC AGCCATTACA CATCAATCAC TCTGCCAATC
CTATTGAACA ACCAAAACCT AGCCAAATTA AGCCAAGCAG CAGGCAAACT GGTCAATGAT
GCACCCTATG GACTACTGGT CGCAGGGCAC GGTTTATACG CTTGGGGGGA GAGCCTAAAC
GAAGCAAGAC GTCATGTAGA AATCTTGGAG TTCCTACTAG AGCTCTGCTG GCGTGAACAA
CTTATAGCCA GACAAAAATC GTGA
 
Protein sequence
MFDSQQQRQA LSNTIRDFHQ RGWCDGTGGN FSLVLQKTPL RLLMAPSGIE KRNIEADELI 
EVDSSGNVIQ GEGRASAETD MHLKIIEQTN AKAVLHTHSM TATWLSNYYK NTGKITIEGW
EMLKGLKGIN SHYTSITLPI LLNNQNLAKL SQAAGKLVND APYGLLVAGH GLYAWGESLN
EARRHVEILE FLLELCWREQ LIARQKS