| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_21731 |
|---|
| Symbol | recQ |
|---|
| ID | 4777593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 1929506 |
|---|
| End bp | 1930999 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640087683 |
|---|
| Product | superfamily II DNA helicase |
|---|
| Protein accession | YP_001018173 |
|---|
| Protein GI | 124023866 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0973141 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCCAC TGATCGAGGC CCTGCACCAT CACTATGGCT GGGATGGTTT CAGGCCTGGT
CAACGTCCTG TGGTGGAAGC GATTCTTGCG GGTCAGGATG TTCTGGCGGT GCTGCCCACC
GGTGGTGGTA AATCGCTTTG TTATCAGCTG CCAGCGCTGT TGCGTGATGG TCTGGTGGTG
GTGATCTCTC CCTTGGTGGC TTTGATGGAG GATCAGGTCA TGCAGCTGCA ACGGCGGGGG
ATTTCCGCCG CTTGTTTGCA TGCTGGCCTG GATCCGTCGC GCCGTCGCGA TGCGCTGGTT
CGCCTGCGAG AAGAGCGCTT GCGTTTGCTT TATCTGGCTC CCGAGCGGTT GCAGGGTGAG
GCCACGCGGC AATTGATCGA GGACACAGCT GCGCAGGGAA AGTTGGTGGC ACTAGCTGTT
GATGAGGCCC ATTGCATCAG TGCTTGGGGC CATGATTTCC GGCCTGATTA CCGTCGCCTG
GGGCAGGTGC GCCGTCTCTG CCCAGGTGTG CCTGTGGTTG CTCTCAGTGC CACTGCGGCT
CCAAGGGTGC GTGCCGACAT CATCCGCCTA TTGGCTCTTC GTCGGCCGCT GGTGCAGGTT
TGCTCGGCCC GGCGCAATAA TCTCCACTAC GCCATGCGGA GGCGATCGAG AGATCCCTTG
CCTGATGTTC TTGAGGCGTT AGGGAAATCA AGAGGGGCGA GTTTGATCTA TGCCCGAACG
CGTCGCTCTG TGGAGCAATG GGCAGAGCGG TTGCAGGCGG CGGATGTTGC GGCTACTCCT
TATCACGCCG GGCTTGACCC GGAGGTGCGC CAGCAGGCGC TGGCTGATTT CCTAGATCAA
GAGAAGCCTG TGCTGGTGGC CACGGTGGCC TTTGGCATGG GTGTAGATCG CAGCGATGTG
GGATTGGTTC TGCATTTGAA TCTGCCTGCA ACACCGGAGG GCTATTTGCA GGAGTCTGGC
CGGGCCGGGC GTGATGGACT GCCGGCCGAT TGCTTGGTGT TGTTTTCTCC TGGTGATCGC
ACCAGCCTTG GTTGGGCGAT GCATGCTTCA GCTCGCCGTT GTGCTGATGA GAGCGCGACG
CAGGAGATTC AGATGCGGTT GGAGCTGGCG CAGCAACAGT TGCGGCGTAT CGAGGCGGTA
GCAGAAGGGG AGTTTTGCCT GGAGCAAGGG CTCTTGCTTG CCGTTGGTGA ATTGGTGCCG
CCTTGTGGTC GTTGCGATCG CTGCCAGCAG ACTGCCCGCC GCCGTGATTG GTCTGAGCAA
GCCTTTGCTG TGCTTGAGGT GCTGGAAGAT AGCAAGGGCA TGAATCTTCG CAGTCTCAGT
GAAAGCCTTT CGTCCACTAC AGGCCGCAAG CAAGAACGTT GGGGTTGGTT GGCTCGCAGG
TTGGTGCAGG AAGAGCTGAT TACGGAGAGC AATGATGGCG TCCAGCGGCT CTATTTACGT
GAGAGCGGTC GGCGCTTTTT ACGCCAACCC TGGCCGCTGC ACTATGCGGC CTGA
|
|---|
| Protein sequence | MDPLIEALHH HYGWDGFRPG QRPVVEAILA GQDVLAVLPT GGGKSLCYQL PALLRDGLVV
VISPLVALME DQVMQLQRRG ISAACLHAGL DPSRRRDALV RLREERLRLL YLAPERLQGE
ATRQLIEDTA AQGKLVALAV DEAHCISAWG HDFRPDYRRL GQVRRLCPGV PVVALSATAA
PRVRADIIRL LALRRPLVQV CSARRNNLHY AMRRRSRDPL PDVLEALGKS RGASLIYART
RRSVEQWAER LQAADVAATP YHAGLDPEVR QQALADFLDQ EKPVLVATVA FGMGVDRSDV
GLVLHLNLPA TPEGYLQESG RAGRDGLPAD CLVLFSPGDR TSLGWAMHAS ARRCADESAT
QEIQMRLELA QQQLRRIEAV AEGEFCLEQG LLLAVGELVP PCGRCDRCQQ TARRRDWSEQ
AFAVLEVLED SKGMNLRSLS ESLSSTTGRK QERWGWLARR LVQEELITES NDGVQRLYLR
ESGRRFLRQP WPLHYAA
|
|---|
| |