| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_21411 |
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| Symbol | lrtA |
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| ID | 4777261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | + |
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| Start bp | 1904553 |
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| End bp | 1905140 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640087649 |
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| Product | light repressed protein A-like protein |
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| Protein accession | YP_001018141 |
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| Protein GI | 124023834 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.656968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTGC TGATCCATGG ACGCAATCTT GAACTAACAC CTGCCCTACG CGAATACACA
CAATCAAAAC TGGAGCGGGC GATTCAACAC TTTGAAGACA TGGTGAAGGA AGCTGATGTG
CACCTTTCAG TCGCTCGAAA CCCGAGCGTG CCTCAACAGA CTGCCGAGGT CACCGTTTTT
GCTAACGGCA CCGTGATCCG CGCTCAAGAA CGCAGTGAAA ACCTTTACGC CAGCATTGAT
CTGGTAGCCA GCAAGCTCTG CCGTCAACTA CGCCGCTACA AGGAACGCCA CAGCGATCAC
CATCACAGCC CCGGGCATCG AGCATCGTCA ACGCCGACCA CCGAAGCGGT AATCGATGAA
GCCCCGATCG ACGGTTCACT ACTCGATGGC AAGGAGGCCC ACCTCCCCAG CCCAGGCGTT
AGGCGCAAAT ACTTCGCCAT GCCGCCAATG AGCGTCGAAC AAGCCAGGCA TCAACTAGAT
CTGATCGACC ATGACTTCTA TCTGTTCCGC GAACAAGAAA GTGGCCAATT GCAGGTGATC
TACCGACGTA ACCATGGCGG CTACGGGGTT ATACAGGCTC GAGATTAA
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| Protein sequence | MKLLIHGRNL ELTPALREYT QSKLERAIQH FEDMVKEADV HLSVARNPSV PQQTAEVTVF
ANGTVIRAQE RSENLYASID LVASKLCRQL RRYKERHSDH HHSPGHRASS TPTTEAVIDE
APIDGSLLDG KEAHLPSPGV RRKYFAMPPM SVEQARHQLD LIDHDFYLFR EQESGQLQVI
YRRNHGGYGV IQARD
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