| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_21291 |
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| Symbol | pdhC |
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| ID | 4777128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 1893868 |
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| End bp | 1895187 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640087637 |
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| Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
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| Protein accession | YP_001018129 |
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| Protein GI | 124023822 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.372749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCTC TGAGCTCAAC GATGACGGAG GGCAAGATCG TTGAGTGGCT TAAGCAACCT
GGCGACAAGG TTGGGCGTGG TGAGTCGGTG CTTGTGGTGG AGTCAGATAA AGCGGATATG
GATGTGGAGT CATTTCAAGA TGGCTACTTG GCCGCGGTCT TGATGCCTGC TGGTCGTTCG
GCTCCAGTGG GTGAAACGAT TGGTTTGATC GTTGAAAGTG AGGCCGAAAT CGCGGCTGTT
CAGGCCAATG CCCCTGCTGC GCCAGCGTCT GATCCTGCCC CTCTCAAGGC CGCTGCAAAA
GTTGTCGATG ACCATGCCCC AGCATCTACT CCGGCGCCCG TCGTGGAGAG TCCCCCTGTT
GCTGCGCCGC CGCCTGTTAC CAGCCAAGCA GTAGAGAGTG ACAAACGCAT CGTTGCTTCC
CCGCGGGCTA AAAAACTTGC TGCGCAGATG GGTGTTGATC TGGCCAAGTT GAGAGGTAGC
GGACCCCATG GCCGTATCCA GGCTGAAGAC GTGCAGCTGG CTGCAGGTCA GCCGATCAGT
GTGCCTCAGG TTGCTGAAGG AAACGCTTCT TTCGCAACGA CGCATGCAAC TTCTGCAGGC
GTTGCTCATG CAGTGTCATC TCCTGTAGGT CAGAGCTTTG GGGCCCCGGG AGAAACCGCA
GCCTTCAACA ACCTCCAACA AGCGGTCAAC CGCAATATGG AGGCCAGTTT GGCCTTCCCC
TGCTTCAGGG TTGGCTACAC GATCACGACT GATCAGTTGG ATGCTTTTTA CAAGCAGGTG
AAGCCTAAGG GCGTCACGAT GACAGCCCTT CTGGCCAAAG CCGTGGCCTT GACGCTTGTG
CGTCATCCCC AGGTGAATGC TGCCTACAGC ACTGCTGGGA TGGTTTATCC AGAGCAGGTG
AATGTTGCTA TTGCAGTGGC GATGGACGAT GGCGGTCTGA TTACACCGGT TTTGCAGAAT
GCTGATCGCA CTGATCTCTA TGAGATGTCG CGGCAGTGGG CCGATCTTGT GAAGCGTTCA
CGCAGCAAGC AGCTGCAACC CGAGGAATAC AGCACTGGTA CTTTCACACT CTCCAATCTG
GGCATGTTTG GTGTGGATCG CTTTGATGCA ATCTTGCCCC CTGGCACTGG CGCAATTTTG
GCGGTAGCTG CATCGCGGCC TGCTGTGGTG GCAGGAAAGG ATGGCTCGAT TGGGGTCAAG
CGCCAGATGC AGGTGAACCT CACTGCCGAC CATCGCGTGA TTTATGGCGC CGATGGGGCG
GCCTTCCTTA AGGACCTGGC AGAGCTGATT GAGACGCGGG TAGAGAGTTT GGCGCTCTGA
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| Protein sequence | MPALSSTMTE GKIVEWLKQP GDKVGRGESV LVVESDKADM DVESFQDGYL AAVLMPAGRS
APVGETIGLI VESEAEIAAV QANAPAAPAS DPAPLKAAAK VVDDHAPAST PAPVVESPPV
AAPPPVTSQA VESDKRIVAS PRAKKLAAQM GVDLAKLRGS GPHGRIQAED VQLAAGQPIS
VPQVAEGNAS FATTHATSAG VAHAVSSPVG QSFGAPGETA AFNNLQQAVN RNMEASLAFP
CFRVGYTITT DQLDAFYKQV KPKGVTMTAL LAKAVALTLV RHPQVNAAYS TAGMVYPEQV
NVAIAVAMDD GGLITPVLQN ADRTDLYEMS RQWADLVKRS RSKQLQPEEY STGTFTLSNL
GMFGVDRFDA ILPPGTGAIL AVAASRPAVV AGKDGSIGVK RQMQVNLTAD HRVIYGADGA
AFLKDLAELI ETRVESLAL
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