Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_19981 |
Symbol | panB |
ID | 4776430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 1756469 |
End bp | 1757287 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640087512 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001018005 |
Protein GI | 124023698 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.18895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCCA GCGAATTAAC TCAACTCAAG CAGGACGGGC GAGCGATCAG CATCCTCACA GCCTGGGATG GCTTAAGCGC GGCCTTGGTT GAGGCCGCTG GAGCCGATGT GGTTCTAGTA GGAGACTCGC TAGCGATGGT GGCACTGTGC CATGCAACCA CCCTGCCTGT GACAGTGGAG CAGATGCTCC ACCACACCCA AGCGGTGGGT CGGGGTTTCA CTCGCCCTCT GCCACAACAG CCCCTCGTCG TCTGCGACCT CCCATTCCTG AGCTACCAAT GCGGAGAAGA CAAGGCTGTA GCTGCAGCTG GAAGCCTGCT CAAGCACTCC TGTGCAGCCG CCGTGAAGCT AGAAGGAGCA GAGCCAGAGG TCCTAGCAGT CATTGAGCGT CTGGTGCGGA TGGGGATCCC AGTCATGGGG CATTTGGGCC TCACTCCACA AGCAGTACAT CGGCTCGGCT ACCGCCGTCA GGCGGAGGAC CCTCGCAGCC AAGCGCAAAT GCTGCAACAA GCAAAACAAC TTGAGCAAGC GGGCTGTTTC GCCCTAGTGG TCGAACATGT GCCGAGTTCC ATCGCTCGTT GCCTGAGTCA ACAACTCACC ATCCCCGTGA TCGGTATCGG CGCTGGCGAA GATTGCGATG GACAGGTAAG GGTCACCGCT GACCTGTTGG GACTAACTCC CAGCCAACCC CCCTTCAGTC CGCCATTGAT CCAAGGTCGC CAGCTGTGCG TAGAAGCCCT TCAAGGTTGG GTGAAGCAAC TGCATCAGCA GGCAGAGACT GCCACCACAA CAACATCTCA ACCAGAACCT GATTGCTGA
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Protein sequence | MRPSELTQLK QDGRAISILT AWDGLSAALV EAAGADVVLV GDSLAMVALC HATTLPVTVE QMLHHTQAVG RGFTRPLPQQ PLVVCDLPFL SYQCGEDKAV AAAGSLLKHS CAAAVKLEGA EPEVLAVIER LVRMGIPVMG HLGLTPQAVH RLGYRRQAED PRSQAQMLQQ AKQLEQAGCF ALVVEHVPSS IARCLSQQLT IPVIGIGAGE DCDGQVRVTA DLLGLTPSQP PFSPPLIQGR QLCVEALQGW VKQLHQQAET ATTTTSQPEP DC
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