Gene P9303_19921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_19921 
Symbol 
ID4777803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp1751207 
End bp1752649 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content56% 
IMG OID640087505 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_001017999 
Protein GI124023692 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.135238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTCGAT CGTTCGCTTC GCCTCTTGCC TTGGTCGCCA CCTCCGCCCT CGCTACTAAT 
CCGGCAACAA CCGCACAGCA TCAAGGCAGT TTCTGGATTC AAACCTTCGG TTGCCAGATG
AACAAGGCCG ATTCAGAGCG CATGGCCGGA ATTCTTGAGG CGATGGGATA CCACGAGGCG
CCAGCAGAAC TAGAAGCGGA TCTCGTGCTC TACAACACCT GCACAATTCG CGATAACGCC
GAGCAGAAGG TTTACAGCTA CTTAGGACGC CAGGCCCGCC GCAAACGAAC ACACCCCCAT
CTGAAGCTGG TCGTTGCCGG TTGCGTAGCG CAACAGGAAG GAGAAGCGCT ACTGCGACGA
ATCCCTGAAC TCGACCTTGT GATGGGGCCC CAACACGCCA ACCGCCTTGA AGCCCTACTC
ACACAGGTGG ACAATGGTCA GCAGGTTGTC GCCACAGATG ACAACCACAT TCTCGAGGAC
CTCACCACAG CTCGACGGGA CAGCACAATC TGCGCCTGGG TCAATGTGAT CTACGGCTGT
AACGAGCGTT GTACCTATTG CGTGGTGCCC TCCGTTCGGG GGAAGGAGCA ATCAAGATCG
CCAGAGGCGA TCCGACTGGA GATCGAGGGC CTGGCCGCCC GTGGATTTCG AGAGATCACA
CTGCTTGGCC AAAACATTGA TGCTTATGGA CGCGATCTGC CCGGGATCAC CCCTGAAGGC
CGCCGCCAAA ACACTCTCAC CGATCTTCTC CATCACATTC ATGACGTGGA AGGAATCGAG
CGCATCCGCT TTGCGACAAG CCATCCGCGC TACTTCACGG AACGATTGAT CGAAGCTTGC
TTTGATCTAC CCAAAGTGTG CGAACACTTC CACATCCCCT TCCAAAGCGG TGATAACGAT
GTGCTTAAGG CCATGGCTAG GGGTTACACA GTGGAGCGTT ATCGACGCAT CGTGAACCGA
ATTCGGGAGC TTATGCCTGA TGCCGCTATC AGTACTGATG TGATCGTGGC CTTCCCAGGC
GAAACCGACG CCCAGTTCCA AAACACCTTG AACCTCGTCG AGGAAGTGGG TTTCGACCAG
GTGAACACCG CGGCTTACTC ACCCCGTCCA AATACGCCTG CAGCCACCTG GAGCAACCAA
CTCCCCGAAG TGGTGAAAGT GGAGCGACTC AAGCAACTCA ATGCGCTGGT GGAACGCGTA
GCCCTGCAGC GCAATAGCCG CTACTCCGGC AAGGTAGAGC AGGTGCTAGC TGAAGGAATC
AATCCAAAAA AACCACAACA GCTGATGGGA CGCACCCGCA CCAACCGGCT CACATTCTTT
GCGGCCGAAG GACCCCAAAG TTGCCGCTAT AGCCCAGGCG ATCTCGTCGA CGTTCAAATC
AACAGTGTGC GGGCTTTCTC ACTGAGCGGA ACCCCTTGTG ATCAAACCAG AAGTCGGCAC
TGA
 
Protein sequence
MFRSFASPLA LVATSALATN PATTAQHQGS FWIQTFGCQM NKADSERMAG ILEAMGYHEA 
PAELEADLVL YNTCTIRDNA EQKVYSYLGR QARRKRTHPH LKLVVAGCVA QQEGEALLRR
IPELDLVMGP QHANRLEALL TQVDNGQQVV ATDDNHILED LTTARRDSTI CAWVNVIYGC
NERCTYCVVP SVRGKEQSRS PEAIRLEIEG LAARGFREIT LLGQNIDAYG RDLPGITPEG
RRQNTLTDLL HHIHDVEGIE RIRFATSHPR YFTERLIEAC FDLPKVCEHF HIPFQSGDND
VLKAMARGYT VERYRRIVNR IRELMPDAAI STDVIVAFPG ETDAQFQNTL NLVEEVGFDQ
VNTAAYSPRP NTPAATWSNQ LPEVVKVERL KQLNALVERV ALQRNSRYSG KVEQVLAEGI
NPKKPQQLMG RTRTNRLTFF AAEGPQSCRY SPGDLVDVQI NSVRAFSLSG TPCDQTRSRH