| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_19601 |
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| Symbol | |
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| ID | 4777206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 1724844 |
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| End bp | 1725785 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640087470 |
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| Product | Type II alternative RNA polymerase sigma factor, sigma-70 family protein |
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| Protein accession | YP_001017967 |
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| Protein GI | 124023660 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0713549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTTCAG CAGCGCCTAA ATCAGCAGAA ACACAGAGGC GTAGAAGTTC TGATCCTGTC
AGCTGGTATC TCACAACGAT TGGGCGTATA CCTCTTCTTA CCCCTGCTGA AGAGATTGAA
CTTGGCAATC AAGTTCAGAC GATGATGAGT CTCACTCAAG ACGGCTCAGT TGCGCCTGAT
GATAAGGAGT TTACGACACA TCAGCGTCGC ATGATTCGCA TTGGCCGTCG TGCCAAAGAA
CGCATGATGA AGGCCAATCT TCGTCTTGTT GTGAGTGTTG CCAAGAAATA TCAAGGCAAA
GGACTGGAAC TCCTCGATCT CATCCAGGAG GGTTCACTTG GTTTAGAGCG TGCTGTTGAA
AAGTTTGATC CAACCCGTGG CTACAAGTTT TCGACCTATG CGTTTTGGTG GATTCGTCAG
AGCATGACAC GTGCGATTGC GTGCCAGTCG CGCACGATTC GCCTTCCTGT ACATCTCAGT
GAAAGGCTGA CCACAATTCG AAAGGTTTCT CTGGATTTGG CTCACAAGCT TGGAGCAATG
CCCAGTCGCT CCGAGATCGC TGAAGCGATG GATATCCCTG TTGATGAACT CGACTCTTTA
TTGCGTCAGG CGCTAACAAC CAGCAGTTTG GATGCGCCAG TGAATGGCGA AGAAGGACGA
AGTTTTCTTG GTGATCTGAT CGCTGATTCC TCTCTTGGTG AACCTCTCGA CAAGGTGGAG
CAGCGTATTC ATCATGAGCA GCTCGGGCGT TGGCTCAGCC ATCTCAGTGA GCAGGAGCAG
CATGTTCTTA AGCTCCGTTT TGGTTTGGAA ACCCATGATC GACACACCTT GGCTGAGATT
GGTCGCTTGA TGGAAGTCTC GCGTGAGCGT GTTCGTCAAG TGGAACTAAA GGCCTTGCGC
AAGCTGCGTA ACCTCACGCG TAGGGTGCCC AACGGGATCT GA
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| Protein sequence | MVSAAPKSAE TQRRRSSDPV SWYLTTIGRI PLLTPAEEIE LGNQVQTMMS LTQDGSVAPD
DKEFTTHQRR MIRIGRRAKE RMMKANLRLV VSVAKKYQGK GLELLDLIQE GSLGLERAVE
KFDPTRGYKF STYAFWWIRQ SMTRAIACQS RTIRLPVHLS ERLTTIRKVS LDLAHKLGAM
PSRSEIAEAM DIPVDELDSL LRQALTTSSL DAPVNGEEGR SFLGDLIADS SLGEPLDKVE
QRIHHEQLGR WLSHLSEQEQ HVLKLRFGLE THDRHTLAEI GRLMEVSRER VRQVELKALR
KLRNLTRRVP NGI
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