| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_18931 |
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| Symbol | amiC |
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| ID | 4777932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | + |
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| Start bp | 1654972 |
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| End bp | 1656162 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640087402 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_001017900 |
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| Protein GI | 124023593 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.306827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGCCAT TGCTCCTGTG GATAACTCGC ACATTGGTCG CATTCGCGCG CAAATGCCAA
GCCTCCAACA CCGGCAGGCA GCACTGTTCT GAGCCAATGG CCTCGGCTCC GTCCCGCCCT
CTCATCCTGC TGGTGGTTGG TGCCTTGCAG ATCCCTTTGG TTTTGGCAGC GTTGCCGGCC
AGAGCGGCAA GCGCTTTAGC GGCCTGGGCA CTTGGAAGCG ACGGGGTGTT GCAGTTGCGT
ACATCAAGAG GGGCTCGTCT AGAAGCGTTC TTTCAACCAG CGGATGGTGC CCAAGGAGCA
AAGGTCTGGA TTGATTTTCC TGGAGAATTG AGCCGCTCCC GCAGCCTGCG GGGTAGCGGT
CCGGTACGTG CGATTCGTTT GGGGAAACCA ACGCCTGGAT CAACTCGACT GGTGATTGAG
TTCAAACCAT CAATCTCTCT GAATCCAAAT CAGCTCAAGC TGATAGGAAC CTCTCCGGAC
CGCTGGAAGC TCAACTTCGA AGGCTTACCG ACCCGTGGGC TTCGCCGTAT CGGTGAAGGA
GACCTGACAG CATCAACTTT GAGCCGATGG GCTCCTGGGA TCCGGATTAC CCCCACACGG
ACGCCTATCA ATGCCTCTGG TTTGCCGAAT GTCCCGCGCG GGCGCTTTAG AGTTGTCATT
GACCCTGGTC ATGGTGGTCC AGACCCTGGT GCTATAGGGA TTCGCGGTGT GCGTGAGACG
GATGTTGTTC TCGATGTTTC CCTTCAGGTG GCCCAGCTAT TAGAAGCTCG AGGGGTGCAG
GTCATCATGA CCCGCACGGC TGATGTGGAT GTGGATCTAC CGCCAAGAGT GGCGATCGCC
AATCGAGTCG CTGCTACTGC ATTTGTAAGC ATTCATGCCA ATGCCATCAG CATGTCCAGA
CCACAGGTCA ATGGAATCGA AACCTTCTAT TTCTCTGATT CCCGTTCAGC CAGGTTGGCG
TCTCATATCC AGCAACAGGT GCTGAACGTC TCCCCTGGAA GCCCTAACAG AGGGGTCAGA
CGGGGCCGTT TCTTTGTCAT CCGGCGAACC ACAATGCCCT CCGCCCTTGT TGAGACAGGT
TTTTTAACAG GACGGCTAGA TGCACCTCGG CTGGCTTCAG CATCCCATCG CCGCAAGTTG
GCTCTGGCTA TTGCTACTGG CATCCTCAAC TATTTGCAGG GGGTCCGTTG A
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| Protein sequence | MQPLLLWITR TLVAFARKCQ ASNTGRQHCS EPMASAPSRP LILLVVGALQ IPLVLAALPA
RAASALAAWA LGSDGVLQLR TSRGARLEAF FQPADGAQGA KVWIDFPGEL SRSRSLRGSG
PVRAIRLGKP TPGSTRLVIE FKPSISLNPN QLKLIGTSPD RWKLNFEGLP TRGLRRIGEG
DLTASTLSRW APGIRITPTR TPINASGLPN VPRGRFRVVI DPGHGGPDPG AIGIRGVRET
DVVLDVSLQV AQLLEARGVQ VIMTRTADVD VDLPPRVAIA NRVAATAFVS IHANAISMSR
PQVNGIETFY FSDSRSARLA SHIQQQVLNV SPGSPNRGVR RGRFFVIRRT TMPSALVETG
FLTGRLDAPR LASASHRRKL ALAIATGILN YLQGVR
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