Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_18901 |
Symbol | ubiD |
ID | 4777727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 1651838 |
End bp | 1653403 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640087399 |
Product | 3-polyprenyl-4-hydroxybenzoate decarboxylase |
Protein accession | YP_001017897 |
Protein GI | 124023590 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.358341 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGC TTCGTCCCGG ACCTGCGTCC CAAGACATGC GGGACTTCCT AGCCCTACTT GAGCAACGTG GCCAACTAAG GCGGATCAGT GCCCCCGTAG ATCCAGATTT AGAACTCGCC GCTATTACTG ATCGGGTGCT GGGCTTGGGT GGGCCGGCCC TGTTGTTCGA AAACGTGATT GGTTCATCGA TGCCAGTGGC AGTGAATCTG ATGGGCACCT TGGAGCGAGT GGTGTGGAGC ATGGGTCTGG ACAACGCTCA GCAACTTGAG GATCTGGGAA CTCGTTTGGC TCTGCTGCAG CAACCAAGGC CGCCAAAGGG TCTGCAAGAA ACCAGACAGT TTGCAAGTGT GTTTTGGGAT CTGATCAAAG CGCGACCAGA TCTGGATCTC ACACCTCCCT GCCATCAGCA GGTGCTGCGT GGAGATGCGT TGAATCTCGA CAACCTGCCT TTGATCCGTC CCTGGCCAGG CGATGCCAGT GGTGTGATCA CCCTGGGCCT TGTGATTACC AAAGACCCGG AGACGGGAGT GCCGAATGTG GGGGTCTATC GCCTACAACG CCAATCGCCA AAGACCATGA CGGTGCATTG GCTGAGCGTT CGCGGCGGAG CCAGGCACCT ACGCAAAGCT GCTGCCATGG GCCAGAAGCT TGAGGTAGCC ATTGCTATTG GTGTACATCC TCTGCTGATC ATGGCCGCAG CAACTCCGAT TCCTGTGCAA CTCAGTGAAT GGCTTTTTGC TGGTCTTTAT GCAGGAGAGG GTGTACGTCT CACTGGCTGC AAAACACTGG ATCTGAAAGT CCCTAGCCAC AGTGAAGTGG TGTTGGAAGG AACCATTACA CCAGGTGAGG AATTAGAGGA TGGTCCATTT GGTGACCATA TGGGCTTTTA CGGAGGAGTG GAGTCCTCAC CATTGGTGCG CTTCCACTGC GTGACTCAAC GCCGCGATCC GATTTTCCTC ACGACGTTTA GCGGCCGCCC CCCCAAGGAA GAAGCGATGC TTGCCATCGC CTTGAACCGC ATCTACACGC CTATCTTGCG TCAACAGGTG CCGGAGATTG TTGACTTCTT TCTACCGATG GAGGCCCTCA GTTACAAGCT GGCGGTGATT GCAATCGATA AGTCTTATCC AGGACAAGCC AAGCGTGCCG CGATGGCTTT CTGGAGCGCA TTGCCCCAAT TCACCTATAC AAAATTCGTT GTCGTGGTAG ATGCAAACAT CAACGTGAGA GATCCACGCC AAGTCGTATG GGCTATCGCT GCACAGGTCG ATCCGCAAAG GGATCTCTTT GTACTTGAGA ACACCCCCTT CGACAGCCTT GATTTCGCTA GCGAACATCT AGGGCTTGGA GGCAGGATGG CCATCGACGC CACCACTAAG ATTGGGCCTG AGAAGCGCCA TGAATGGGGC GAGCCACTCA GCCGGGATGC AGATCTAGAA AGCAGGGTGG ATGCTCGATG GCAGGAGTTG GGGCTGGAGG ATTTGGGCAG CGAAGAACCT GATCCAAGCC TGTTCGGTTA TGTGATGGAG AGCCTTTGTC GTCATGCGAT GGTCAAAAAG ACCTGA
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Protein sequence | MPLLRPGPAS QDMRDFLALL EQRGQLRRIS APVDPDLELA AITDRVLGLG GPALLFENVI GSSMPVAVNL MGTLERVVWS MGLDNAQQLE DLGTRLALLQ QPRPPKGLQE TRQFASVFWD LIKARPDLDL TPPCHQQVLR GDALNLDNLP LIRPWPGDAS GVITLGLVIT KDPETGVPNV GVYRLQRQSP KTMTVHWLSV RGGARHLRKA AAMGQKLEVA IAIGVHPLLI MAAATPIPVQ LSEWLFAGLY AGEGVRLTGC KTLDLKVPSH SEVVLEGTIT PGEELEDGPF GDHMGFYGGV ESSPLVRFHC VTQRRDPIFL TTFSGRPPKE EAMLAIALNR IYTPILRQQV PEIVDFFLPM EALSYKLAVI AIDKSYPGQA KRAAMAFWSA LPQFTYTKFV VVVDANINVR DPRQVVWAIA AQVDPQRDLF VLENTPFDSL DFASEHLGLG GRMAIDATTK IGPEKRHEWG EPLSRDADLE SRVDARWQEL GLEDLGSEEP DPSLFGYVME SLCRHAMVKK T
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