| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_18571 |
|---|
| Symbol | |
|---|
| ID | 4776003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 1618573 |
|---|
| End bp | 1620144 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640087366 |
|---|
| Product | NAD(P)H-quinone oxidoreductase subunit 4 |
|---|
| Protein accession | YP_001017864 |
|---|
| Protein GI | 124023557 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.960985 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCA ATTTGCCGCT GACGGCTGCG TCCCAGGCCT CATTCCCCTG GCTTTCCCTG
ATCGTGCTGC TGCCGGCAAT GGGTGCCCTG CTGATGCCTC TGTTGCCAGG GAATGAAACA
AGTAACTCCC AGGCACCACG AAATTTTGCA CTGGCCTTTC TGCTGGTGGA TTTCGTGCTC
ATGCTGGTTG TGTTTAGCCG CATGTTTGAT GGCCAGGATG GAGGGCTTCA GCTGGTTGAA
CGGGTTAGTT GGATTCCCTT CATTGGCCTG GAGTGGTCTC TCGGAGCAGA CGGCCTTTCG
GCTCCTCTGG TTGTACTTAG CGGGCTGATC ACTCTTCTTG CCGTGGCAGC TAGCTGGAAG
GTGCAAAGCA AGACAAGGCT TTATTTCGCC CTGTTGTTGG TTCAGGCTTC TGCCCAGGGG
CTGGTTTTCC TCTCTCAAGA TTTCCTGCTG TTCTTTCTTG CTTGGGAACT AGAGCTGGTT
CCGGTCTACC TGCTAATTGC CATCTGGGGC GGAAGCAGAC GTCTATATGC CGCCACCAAA
TTCATTCTCT ACACCGCTCT AGCGTCTTTA CTGATCCTGA TCAGCGGACT CGCTCTGGCA
CTTTCGGGTG GTGAGTTCAC GCTCAACCTC ACTGAGCTGG CCAATCGATC TCCAGAAGGC
AGCCTTGGAC TCCTCTGTTA TCTGGGCTTT CTGGTGGGCT TTGGCGTAAA GCTACCGATG
TTTCCTCTCC ACACCTGGCT GCCAGATGCC CACGGAGAAG CCAACGCACC AGTGTCGATG
CTGCTGGCAG GGGTACTCCT AAAGATGGGT GGCTATGCCC TTTTGCGCTT CAACGTGCAA
ATGCTGCCTG ATGCTCATCT CCAGCTAGCG CCGGCCCTGA TCGTGATTGG GATCGTCAAC
ATCATCTACG GAGCACTCAA CGCCTTTGCT CAAGACAACG TGAAACGACG AATTGCCTGC
AGTTCTGTGA GCCACATGGG CTTCGTTCTG TTGGGTATCG GCGCGATCGA TGCTCTCGGG
ATCAGTGGGG CCATGCTGCA GATGATTAGC CATGGCCTGA TTGCAGCAGC CATGTTTTTC
GTCACAGGAA CGTTTTACGA ACGCACGCAG ACCCTCTCCA TCCCCAACAT GGGTGGCCTG
GCCAAGGTCT TGCCAATCAC CTTCGCTTTT TTCTTGGCCA GCTCCCTGGC TTCCCTCGCC
CTGCCAGGGA TGAGCGGCTT TGTCAGTGAA ATCACCGTCT TCCTCGGCAT CATTAGTCAG
GAAGGATTCA CTTCAATATT CAGGGTTATC ACCATCGTGC TGGCGGCGAT TGGACTAGTG
CTTACCCCCG TCTATTTGCT GTCGATGTGT CGACGGGTCT TTTTTGGCCC CAGGATTCCC
GCCCTTGCAA TGATCGAAGA CATCAACCCC AGAGAGCTGA CCATTGGGCT CAGTCTGATT
GTGCCCACGT TGGTGATCGG ATTTTGGCCT CGAGTCGCCA TCGATCTCTA TGAGGCTTCA
ACCAATGCTC TCGCTGACCG ACTGATTAGC CATAGCTTGG TAGCCCAAGG TTCCCTGCTA
CCCCTTGGCT GA
|
|---|
| Protein sequence | MDANLPLTAA SQASFPWLSL IVLLPAMGAL LMPLLPGNET SNSQAPRNFA LAFLLVDFVL
MLVVFSRMFD GQDGGLQLVE RVSWIPFIGL EWSLGADGLS APLVVLSGLI TLLAVAASWK
VQSKTRLYFA LLLVQASAQG LVFLSQDFLL FFLAWELELV PVYLLIAIWG GSRRLYAATK
FILYTALASL LILISGLALA LSGGEFTLNL TELANRSPEG SLGLLCYLGF LVGFGVKLPM
FPLHTWLPDA HGEANAPVSM LLAGVLLKMG GYALLRFNVQ MLPDAHLQLA PALIVIGIVN
IIYGALNAFA QDNVKRRIAC SSVSHMGFVL LGIGAIDALG ISGAMLQMIS HGLIAAAMFF
VTGTFYERTQ TLSIPNMGGL AKVLPITFAF FLASSLASLA LPGMSGFVSE ITVFLGIISQ
EGFTSIFRVI TIVLAAIGLV LTPVYLLSMC RRVFFGPRIP ALAMIEDINP RELTIGLSLI
VPTLVIGFWP RVAIDLYEAS TNALADRLIS HSLVAQGSLL PLG
|
|---|
| |