| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_18041 |
|---|
| Symbol | |
|---|
| ID | 4776066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 1570942 |
|---|
| End bp | 1572381 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640087312 |
|---|
| Product | glutamate decarboxylase |
|---|
| Protein accession | YP_001017811 |
|---|
| Protein GI | 124023504 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
|---|
| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.171895 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCTGC ATCGTTCTAA TCCCCGCTCC AACGATCTGG AAGAACATGC CATTTGGGAA
ACCGTTGATG CATTGGTCTC ACCATTACCA CGCGCGACTT TTCCGCAAGA GTGCCGTCCT
GCATTGACAA CATTTAATTT GCTCAAGGAG GAGTTATTGC TTGACGGCAA CAGCAAACAA
AATCTGGCCA CCTTCTGTCA GACCTATGAA AGTCACCAGG TGGCTGATCT AATGGCCCTC
GCGGTTGACA AGAACCTGAT CGACAAGGAC GAATATCCCC AAACCGCAGA GATTGAACGC
CGTTGTGTTT CGATGATGGC TGATTTATGG CACGCCCCCG GTGAAGCTGT GGGCTGCTCC
ACCATCGGTA GCAGTGAGGC CGCCATGCTG GGTGGCTTGG CTGCGAAATG GCGTTGGCGT
GAACATCGCA AAGCGGCAGG TCAGTCGATC GATCGCCCCA ACATGGTTTG CGGCAGTGTA
CAAATCTGCT GGACGAAATT TGCCCGCTAC TGGGACGTTG AGTTGCGGGA GGTGGAGATG
ACCTCCGGCG AGCTCTGCAT GTCTCCAGAA CGAATGCTGG AGCAAGTGGA TGAGAACACC
ATCGTTGTGG TGCCTACCCT GGGCGTCACT TATCACGGCC TGTATGAAGA CGTACAAGCC
ATCAGTCAGG CCCTCGATGA GCTGCAACAG CGAAAAGGAC TCGACATTCC TATCCATGTG
GATGCAGCCA GCGGTGGCTT TCTTGCTCCT TTCTGTGCCC CTGATCTGGC TCCCTGGGAT
TTCCGTTTGC CGCGCGTGAA GTCAATCAAC TCCTCTGGCC ATAAGTTCGG CTTAGCTCCT
CTGGGTGTGG GTTGGGTTCT TTGGCGTGAG TCCAGTGATC TTCCGGAAGG ATTGGTTTTC
CATGTGAGTT ACCTAGGAGG CGATATGCCA ACGTTTCAGA TCAACTTCTC GCGGCCAGCG
GGGCAGGTGA TCTCCCAGTA CTACGACTTT GTCCGCCTAG GTCGCGATGG TTATCAAGCC
ATCCATGGAG CGAGCTATGC CAATGCTCAA TATGTTGCTC AAGAACTCAA AAAGCTAGGC
CCATTTGAAT TGATACACGA TGGCAACCCA GCACGTGGCA TCCCCACTGT GGTGTGGACA
TTGCGAGCCG GCCAAGAGCT TGGTTTCAAC CTTTACGACC TCTCTGATCG ACTGAGATTA
CGTGGTTGGC AAGTGCCAGC TTATCCATTC ACAGGTGAGC TTGCTCATCA AGCCTTTCAG
CGGATCTTGG TAAAACGCGA TTTCTCACGT GAAATGGCTG ATCTCCTACT TACCGACATC
CGCAACGCCA TAACTCATTT CGAGAGTCAT CCTGTCAAGA TCAGTCTTAA CGCTACTGAA
GCAGCGTCTA CTAATCATCT CGGCCGTTCA ATGGTTGAAT CCCTTGATGC GCATGGATGA
|
|---|
| Protein sequence | MALHRSNPRS NDLEEHAIWE TVDALVSPLP RATFPQECRP ALTTFNLLKE ELLLDGNSKQ
NLATFCQTYE SHQVADLMAL AVDKNLIDKD EYPQTAEIER RCVSMMADLW HAPGEAVGCS
TIGSSEAAML GGLAAKWRWR EHRKAAGQSI DRPNMVCGSV QICWTKFARY WDVELREVEM
TSGELCMSPE RMLEQVDENT IVVVPTLGVT YHGLYEDVQA ISQALDELQQ RKGLDIPIHV
DAASGGFLAP FCAPDLAPWD FRLPRVKSIN SSGHKFGLAP LGVGWVLWRE SSDLPEGLVF
HVSYLGGDMP TFQINFSRPA GQVISQYYDF VRLGRDGYQA IHGASYANAQ YVAQELKKLG
PFELIHDGNP ARGIPTVVWT LRAGQELGFN LYDLSDRLRL RGWQVPAYPF TGELAHQAFQ
RILVKRDFSR EMADLLLTDI RNAITHFESH PVKISLNATE AASTNHLGRS MVESLDAHG
|
|---|
| |