Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_17941 |
Symbol | |
ID | 4778951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 1563868 |
End bp | 1565082 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640087302 |
Product | TPR repeat-containing protein |
Protein accession | YP_001017801 |
Protein GI | 124023494 |
COG category | [R] General function prediction only |
COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.398676 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCTAG AGACTCCTGA AGCCATGGCA AATGAGTCGT CCAATCATTC CGTATCTGAG CAAACTGCAA ATGACTACTT CAAAGAAGGT GAAAAAAGAT TTCATTTAAA AGATTATCAA GGGGCAATTG ATTGTTACAG CAAAGCAATT GAGATCAATC CAAATAATGC CATTGCATAC AATAATCGAG GGAATGTAAA AGATGAACTA GGCGATTATC AAAGCGCAAT GAATGATTAC AATAAAGCAA TTGACATTAA CAGTCTGGAT GCCAGCTTTT ACATCAATAG AGGTGTCGTC AAGAGACACT CAAATAACAT CGAAGGGGCA ATCGATGATT ACACAAAAGC TATTGAACTA GATCCACAAC ACGCTACTGC TTATTACAAT AGGGGGATTG CTAAAGTCAA TCTAAGCGAC AACAAAGGGG CTATCTTTGA TTATACTAAG GCACTTACCG TAAATCCAAG ACATGCTAAA TCATACTACA ATAGAGCGAT TAGCAAAAAC AATATTAATG ATATCAAAGG GGCAATTTCT GATTACACAA AAGCAATTGA GGCCATGCCG GTGTTTGCCT CTGCCTATTA CAATCGCGGC AATTTAATGG AGAGACTGGG CCGAAGGCAA GCAGCGGTTA CTGACCATGA GAAGGCGCTA GTAATAAAAC CACAACTTCT CACTGCGATG AACGAGCGTG GTGAAAATAA AAACTTAGTT GAGAATAAGA TTGTAAATGA TTTGAACAAT GAAGAAGACA GAAGTCAGCT AGATGCATTT AATTATTATA GCCAAGGCAA TGCTGAACAA AAGCGAGGCA ACAATCAATC AGCGATCGAC TGTTACACCA AGGCGATAGA AGTCAATCCA CACTATGCCG AGGCATACAA CTACAGGGGC CTAGCTAATT ACAACCTTTG TGACTATCAA GCTGCGCTTG ATGATTACAA CAAGGCAATA GAAATTAACT CGATATATGA AGATGCCTAC ATTGGTTGCG GTCTTGCAAA GTCTGCATTA AGTGATTACC AAGGTGCAAT TGGAGCCTAT GAGAGGGTAC TAGTCATTAA CCCTAAGAAT GTTGCTGCCT ATAGAAATCG TGGTATTGCC AAAGAATTGG AGGGAAATCT AGAGGGTGCT TGTTCTGATT GGAGGCAGGC CTCCTCTCTG GGAGATGAAG ATGCTGCAGA ATGGGTAAAG GCACAATGTT TTTAA
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Protein sequence | MALETPEAMA NESSNHSVSE QTANDYFKEG EKRFHLKDYQ GAIDCYSKAI EINPNNAIAY NNRGNVKDEL GDYQSAMNDY NKAIDINSLD ASFYINRGVV KRHSNNIEGA IDDYTKAIEL DPQHATAYYN RGIAKVNLSD NKGAIFDYTK ALTVNPRHAK SYYNRAISKN NINDIKGAIS DYTKAIEAMP VFASAYYNRG NLMERLGRRQ AAVTDHEKAL VIKPQLLTAM NERGENKNLV ENKIVNDLNN EEDRSQLDAF NYYSQGNAEQ KRGNNQSAID CYTKAIEVNP HYAEAYNYRG LANYNLCDYQ AALDDYNKAI EINSIYEDAY IGCGLAKSAL SDYQGAIGAY ERVLVINPKN VAAYRNRGIA KELEGNLEGA CSDWRQASSL GDEDAAEWVK AQCF
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