| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_17221 |
|---|
| Symbol | |
|---|
| ID | 4777029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 1507190 |
|---|
| End bp | 1508434 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640087231 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001017731 |
|---|
| Protein GI | 124023424 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0786] Na+/glutamate symporter |
|---|
| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACAT TTGAAATTAG ATCGCTGATA TCAATCTCAA TTGGCATACT TGTACTGTTT
ATTGGCAAGC GCATCAATGG CAATATTCAA GTGCTGCAGA ATTTATCGAT TCCTGATTCT
GTTACAGGCG GACTGATTGC AGCACTAGCA ATCACACTTG TGAAATGGAC AACGGATATA
GAGGTTATAT TTGATCTTGG TGCAAGAGAT TTCTTGCTTA TTTATTTCTT TACTACGGTT
GGTATAAGTT CAAATTTAAT CAACATGAGA AGGGGTGGGA AAGCCCTGGG AATATTACTC
GGTCTGGTTA TTGCTTTCAT TACGATTCAG AACATTTTCG GTGAATGGAC AGTTAATCTA
TTTGGACTCC AAGAAGGCCT TGGACCACTT TTGGGTTCAG TTTCGCTTGC AGGTGGCCAT
GGTGTGACCA TCGCATGGGC GCCAACCTTT GCAAAACAAT TTGGCATCAA GAATGCTTTG
GAAATTGGCG TTGCAGCATC TACATTTGGG TTGTTGGTTG CCAGCCTAAT AGGTGGGCCA
ATCGCCAATT ACTTGATTCG AAAAAATCAT CTGAATTTAG ATCATAAAAA AGAAATATAT
AATGAAAACA GGAATGGAGA AGAAAATACA GACAAGACGG AATTGAATAA TCAATTACCA
TCAAAATTGG ATTACAACAG TATTCTTTCG TCAGTGCTGG CTGTCAATAT CTGTATTATT
CTCGGGAAAA TATGCCAGGA ATTTCTTTTT AAGTTAGATA TTCAACTGCC ACTTTTTGTT
GTTTCTATGA TCGTTGGAAT CATTTTGAGC AGCATTTTGC CGGATCGTAA GATTTTAAAT
GATTTTCTAA TTTGGCCTAA GCAAACAGCT GCTTTATTAC TTCTGGCAGA GCTTTCCCTT
GGCACATTTC TGGCAATGTC AATCATGAGT CTGCAGTTTT GGGATCTCTT GGATCTCCCT
CCGGCCTTGC TGTTTATATT GGTTTTCCAA ACTATCCTCT CTATCGTAGT CAATCTATAT
CTTGTTTTTC CGCTGATGGG CCGCAACTAC GACGCAGCTG TGATTTGCTC AGGATTTGCG
GGCATGTCGA TAGGGTCATC GGCTGCTGGG CTCGCAAATA TGACGGCAAT ATCAAGGAAG
TATGGGCCAA CCAAAAAAGC ATTTATAGTC GTGCCACTGA TCGCAACATT TATTGAGATT
ATAAATTCAG GTCTTATTAT TCCAGCCTCA ATTAGGTTTT TATGA
|
|---|
| Protein sequence | MDTFEIRSLI SISIGILVLF IGKRINGNIQ VLQNLSIPDS VTGGLIAALA ITLVKWTTDI
EVIFDLGARD FLLIYFFTTV GISSNLINMR RGGKALGILL GLVIAFITIQ NIFGEWTVNL
FGLQEGLGPL LGSVSLAGGH GVTIAWAPTF AKQFGIKNAL EIGVAASTFG LLVASLIGGP
IANYLIRKNH LNLDHKKEIY NENRNGEENT DKTELNNQLP SKLDYNSILS SVLAVNICII
LGKICQEFLF KLDIQLPLFV VSMIVGIILS SILPDRKILN DFLIWPKQTA ALLLLAELSL
GTFLAMSIMS LQFWDLLDLP PALLFILVFQ TILSIVVNLY LVFPLMGRNY DAAVICSGFA
GMSIGSSAAG LANMTAISRK YGPTKKAFIV VPLIATFIEI INSGLIIPAS IRFL
|
|---|
| |