Gene P9303_16991 details

Gene Information

• Locus tag: P9303_16991
• Symbol: proV
• ID: 4777691
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: -
• Start bp: 1486280
• End bp: 1487431
• Gene Length: 1152 bp
• Protein Length: 383 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640087208
• Product: ABC transporter, ATP binding component, glycine betaine/proline family protein
• Protein accession: YP_001017708
• Protein GI: 124023401
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4175] ABC-type proline/glycine betaine transport system, ATPase component
• TIGRFAM ID: [TIGR01186] glycine betaine/L-proline transport ATP binding subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.662669
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCAGGCA TGACACCCCT CATCCGCATC GACAAGCTAT GGAAGGTGTT TGGTGAGCAT 
CCTGAACGTG CGCTTGACGA TCACTGTCAA AGCATGGATG CTGAGCAGCT CAATGCTCGA 
ACCGGACTCA AGGCTGCCGT ACGCGATGTA ACGCTGTCAA TCTCTAGTGG CGAGATTTTT 
GTGGTGATGG GCCTTTCGGG TTCAGGAAAG TCCACGCTGC TACGCATGAT CAATGGCCTA 
ATCCTCCCAA CTGGCGGTGA GGTTTCCGTT GACGGCAAGC CGATCACTCA GTTGGCAACT 
GGGGAGCTGC AAAAGCTTCG CAGCAACAAA ATGGCCATGG TTTTCCAATC TTTTGCGCTC 
TTCCCCCAGC GAACCGCACT CGAGAATGCT GCCTTCGGCC TTGAGGTTGC GGGAGTTCCG 
CGACAAAAAA GGCTGGAAAA GGCCAGGGAA GCACTTGAGC GTGTTGGTCT TGGTAAGGAT 
CTCGACAGGC TGCCTCAACA GCTCTCTGGC GGCATGCAAC AGAGAGTTGG CCTAGCCAGA 
GCCCTGGCAC TTGATCCTCC AATCCTGCTC ATGGATGAGG CCTTCTCTGC TCTTGATCCT 
CTGATTCGGC GCGAGATGCA AGAACAACTG CTGGAACTTC AGGCAGAGAG TCCCCGCACG 
ATCGTCTTTA TTTCCCATGA TCTAGACGAA GCTGTAAGGC TTGGTGATCG CATCGCTCTA 
ATGAAAGAAG GCAAAGTTCT GCAATGTGGA ACGCCACGTG AGCTGCTCTG CAAACCCGCC 
AATGAGCAAG TTCGTCATTT CTTCCAAGAT GTTGATGCCG CCTCTGTGAT CACGGTTGAT 
ACCGTTGCCG AATCACCCGC TCGCCTAATA AATCAATCAG ATTTGCGGCA GCTGCAGATA 
GAAGGAGATA CAGCAATAGA AGCACCGACG TGCATCGTGG ACGATCGAAA TATCTTCAAA 
GGTGTGCTTC AAAAGAACGG CAAAATCATT CCAGCTGAAA CTGGCCCAGC TCTCATCGCC 
GAGACCACCA TTCGCGATGC CATGAAATCT GTTGCCAACG CCCCGTATCC ACTTCCAGTG 
ATTGGATCAG ATCAGCGCCT CATTGGCGTG ATTAGTCCAC GTCGACTTTT GCGCTCGATG 
ATCCTGAGAT GA 

 

Protein sequence

MSGMTPLIRI DKLWKVFGEH PERALDDHCQ SMDAEQLNAR TGLKAAVRDV TLSISSGEIF 
VVMGLSGSGK STLLRMINGL ILPTGGEVSV DGKPITQLAT GELQKLRSNK MAMVFQSFAL 
FPQRTALENA AFGLEVAGVP RQKRLEKARE ALERVGLGKD LDRLPQQLSG GMQQRVGLAR 
ALALDPPILL MDEAFSALDP LIRREMQEQL LELQAESPRT IVFISHDLDE AVRLGDRIAL 
MKEGKVLQCG TPRELLCKPA NEQVRHFFQD VDAASVITVD TVAESPARLI NQSDLRQLQI 
EGDTAIEAPT CIVDDRNIFK GVLQKNGKII PAETGPALIA ETTIRDAMKS VANAPYPLPV 
IGSDQRLIGV ISPRRLLRSM ILR