Gene P9303_16761 details

Gene Information

• Locus tag: P9303_16761
• Symbol: typA
• ID: 4775954
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 1465224
• End bp: 1467026
• Gene Length: 1803 bp
• Protein Length: 600 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640087185
• Product: tyrosine binding protein
• Protein accession: YP_001017685
• Protein GI: 124023378
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00485] translation elongation factor TU; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.262859
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTGCCC AGGCCAAGGC GATCCGCAAC ATTGCAATTA TCGCTCACGT GGATCACGGC 
AAAACAACCT TGGTTGATGC CCTGTTGACT CAGTCCGGGA TCTTCCGAGA CAACGAGGCT 
GTGCCCACAT GTGTCATGGA CTCCAATGAT TTGGAAAGGG AACGGGGCAT TACGATCCTT 
TCAAAGAACA CGGCCGTTAC CTACGACGAG ACGCGGATCA ACATTGTTGA TACCCCTGGT 
CATGCCGATT TTGGCGGTGA GGTTGAGCGG GTGCTCGGCA TGGTTGATGG CTGTTTGCTG 
ATCGTTGACG CCAACGAGGG GCCTATGCCA CAGACGCGTT TCGTGCTCAA GAAGGCGCTT 
GAGCAGGGAT TGCGGCCGAT TGTGTTCGTA AACAAGATTG ATCGTGCGCG GGTGGATCCT 
GAAACCGCTG TCAACAAGGT GCTCGATCTG TTTATTGAAC TCGGTGCAGA TGATGACCAA 
TGTGATTTCC CGTACTTATT CGGCAGTGGA ATGGGAGGTT TTGCCAAGCC GGATATGGCA 
ACTGAAAGTC AAACAATGAA GCCACTATTT GATGCCATCC TGCGTCATGT TCCACCACCT 
GTTGGAGATG AGAACAAGCC TCTTCAGCTA CAGATCACTA CTCTCGATTA TTCAGACTTC 
CTGGGCAGGA TTGTGATTGG TCGGGTCCAT AACGGGGTTA TCCGTAATGG TCAGAGTGCT 
TCGTTGATTA AGGATGATGG CAGCATTAAA CGTGGCCGGA TTAGCAAACT ACTCGGTTTC 
GAAGGGTTGC AACGGATTGA GATACAAGAA GCTGGAGCGG GAGATCTCGT TGCTTTGGCC 
GGTTTCGATC AAGTCAATAT TGGCGAGACC ATTGCCTGTC CAGATGAACC AAAAGCTTTA 
CCTCTAATCA AGGTGGATGA ACCCACTTTG CAGATGACAT TTGTCGTCAA TGATTCACCC 
TTTGCTGGCA AAGAAGGCAA ATTCGTCACT AGCCGGCAGC TGCGAGATCG TTTACGCAAG 
GAATTACTCA CCAATGTTGC CTTACGCGTT GAGGACACTG ATTCTCCTGA TCGTTTTGCG 
GTTAGCGGGC GTGGTGAACT ACACCTGGGC ATCCTGATTG AAACCATGCG CCGCGAGGGA 
TTTGAGTTTC AGGTAACCCA GCCTCAGGTG ATCTTCCGAA CGATTGACGG CACTCCTTGC 
GAGCCCGTTG AAACCTTGGT GATGGATGTA CCAGAGGCAG CCGTTGGCGC CTGCATTGAG 
AAGTTGGGTG TGCGTCGGGG TGAAATGCAG AACATGGAAA CCGGTAACGA CGGTCGCACC 
CAGCTTGAAT TTGTTGTTCC TTCTCGGGGG TTGATCGGTT TACGTGGTGA GTTTGTACGT 
GCTACCAGGG GTGAGGGAAT TATGAGCCAC TCTTTTTTTG AATATCGCCC AATGTTGGGA 
GAGTTTGATG CTCGTCGGAA TGGTGTTCTG ATTGCTTTTG AACAGGGCAC TGCGACCTTC 
TACGCACTCA AGAATGCTGA GGGTCGTGGT CAGTTCTTCA TCTCTCCGGG TGTCAAGGTT 
TATAAGGGGA TGATCGTTGG CGAAAACAAT CGACCTCAGG ATATGGAGTT AAACGTTTGC 
AAGGCCAAAC AACTCACAAA TATCCGCTCT GCTGGTGCAG AAGAGCTCGA TACCTTGCAG 
ACACCTGTTC AGATGACCCT TGAACGTGCT CTTGAGTACA TCGGTCCAGA TGAAATGCTT 
GAGGTCACCC CAGAGTCCAT TCGCTTGCGC AAGTTGCCTG CCAAGAAGAT GGCCAAACGC 
TGA 

 

Protein sequence

MSAQAKAIRN IAIIAHVDHG KTTLVDALLT QSGIFRDNEA VPTCVMDSND LERERGITIL 
SKNTAVTYDE TRINIVDTPG HADFGGEVER VLGMVDGCLL IVDANEGPMP QTRFVLKKAL 
EQGLRPIVFV NKIDRARVDP ETAVNKVLDL FIELGADDDQ CDFPYLFGSG MGGFAKPDMA 
TESQTMKPLF DAILRHVPPP VGDENKPLQL QITTLDYSDF LGRIVIGRVH NGVIRNGQSA 
SLIKDDGSIK RGRISKLLGF EGLQRIEIQE AGAGDLVALA GFDQVNIGET IACPDEPKAL 
PLIKVDEPTL QMTFVVNDSP FAGKEGKFVT SRQLRDRLRK ELLTNVALRV EDTDSPDRFA 
VSGRGELHLG ILIETMRREG FEFQVTQPQV IFRTIDGTPC EPVETLVMDV PEAAVGACIE 
KLGVRRGEMQ NMETGNDGRT QLEFVVPSRG LIGLRGEFVR ATRGEGIMSH SFFEYRPMLG 
EFDARRNGVL IAFEQGTATF YALKNAEGRG QFFISPGVKV YKGMIVGENN RPQDMELNVC 
KAKQLTNIRS AGAEELDTLQ TPVQMTLERA LEYIGPDEML EVTPESIRLR KLPAKKMAKR