| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_16231 |
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| Symbol | secF |
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| ID | 4778622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | + |
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| Start bp | 1422549 |
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| End bp | 1423628 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640087132 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001017632 |
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| Protein GI | 124023325 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.205013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTTT CATCATCTTC AGGAACTCCT CAACGCCCAC TGAGATTTGA ACTTTGTCGT
CAACGACGAC GCGTTTGGGG AGTCTCAGGC CTGTTTGTGG TTTTCAGCTT GGTGGGCTTG
ATCCTCTGTT GGCTAAACCC TTCGATTGGG GCTCCCCTTC GTCCAGGACT TGACTTCACT
GGAGGAACTC AAATCCAGCT GGAGCGCAGC TGTAGCAAGA GCTGTCAGTC GCTGAAAACC
AAAAGTGTTG AAGAGGTTTT GGGGGCTCTT GAGTTACCCG CTGACAAAGA CAAGGTTGCT
CCAAACCTCT CCCGAGCCAG GGTTCAACTT CTTGATGGTG GTCAGTCTCT GGTCTTGAGG
TTGCCCTTCC TCTCTGCGGC TCAGGGGCAG GCTGTCATCA AGGCAATGGA TCCTGTAGCG
GGTCCGTTTC AGAGTGGTGG TCAATCGGTC GACACCATTG GCCCAAGTCT GGGAGGCCAA
TTGCTGCGCA GCAGCTTGAT TTCTCTTTTG GTGGCGTTCA CGGGAATCGC CATCTACATC
AGCCTCCGTT ACGACCGTCG CTATGCCCTT CTGGCCCTTG TGGCCCTTGC CCATGACGTG
ATCATTGTTT GTGGGATATT CGCTTGGCTG GGCCTGCTGA TAACGCTTGA GGTGGATAGC
CTCTTCGCTG TAGCGCTGCT CACCATTGCC GGCTACTCGG TCAATGACAC TGTGGTGGTC
TTTGACCGGA TCCGTGAGCG CAGTCGCGAA GATGACTCAC TGCCACTGAC GGAACAGGTT
GATCGTGCCG TATCCGCGAC CCTCACAAGG ACCCTCTACA CAAGCGGTAC GACCCTGCTG
CCTCTGCTCG CTCTGATCCT CTTTGGCGGT GCGACGCTCT ACTGGTTTGC GGTTGCACTT
GCTCTTGGAG TGGTGGTTGG TAGCTGGTCG AGTATTGCTC TAGCCCCTTC ATTGTTGAGC
CTCTGGCAAG GCAGTGGTCC TCCGAAAGCT CCTTTATCAG CCCCTGCTGC TTCTCCACAA
CCGCCGTTGT CTTCCTCCCA GTCTCCGCTT GAGGGAGAAG ATGTGATGTC AGATGGCTGA
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| Protein sequence | MAVSSSSGTP QRPLRFELCR QRRRVWGVSG LFVVFSLVGL ILCWLNPSIG APLRPGLDFT
GGTQIQLERS CSKSCQSLKT KSVEEVLGAL ELPADKDKVA PNLSRARVQL LDGGQSLVLR
LPFLSAAQGQ AVIKAMDPVA GPFQSGGQSV DTIGPSLGGQ LLRSSLISLL VAFTGIAIYI
SLRYDRRYAL LALVALAHDV IIVCGIFAWL GLLITLEVDS LFAVALLTIA GYSVNDTVVV
FDRIRERSRE DDSLPLTEQV DRAVSATLTR TLYTSGTTLL PLLALILFGG ATLYWFAVAL
ALGVVVGSWS SIALAPSLLS LWQGSGPPKA PLSAPAASPQ PPLSSSQSPL EGEDVMSDG
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