Gene P9303_16171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_16171 
SymbolksgA 
ID4778136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp1417716 
End bp1418558 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content54% 
IMG OID640087126 
Productdimethyladenosine transferase 
Protein accessionYP_001017626 
Protein GI124023319 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.216071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTTT CCGGACATCA CGCTCGCAAG CGCTTTGCTC AACACTGGCT GATTGATGCC 
GCTGTGTTGA CCCAGATTCT CGATGCTGCT GATGTTCAAC CAGATGATCG TCTGCTGGAG
GTAGGTCCTG GTCGTGGAGC ACTCACTGAA AGGTTGTTGG CCTCTTCTGC CTCTGCTGTT
CATGCTGTTG AACTTGATCG CGATCTTGTC TCTGGGTTGA GGCAGCGATT TGCGGATCAA
GCCCGCTTCA GCTTGCAAGA AGGTGATGTG TTGTCTGTTC CATTGACTCT TGCTGATGGC
CGTGCTGCGA ACAAAGTGGT GGCCAATATT CCCTATAACA TCACCGGGCC TCTGCTTGAG
CGTCTTCTCG GTCGCTTGGA TCGACCTGTT GATCATCCCT ATCAACGCCT TGTGCTTCTT
TTGCAAAAGG AAGTCGCTCA ACGGATTCGT GCCTTGCCCG GGCAGAGCTG TTTTAGTGCT
CTAAGCGTGC GCCTGCAGTT GCTCGCTCAT TGCACAACTG TTTGCCCAGT GCCGCCGCGC
TCTTTTAAAC CGCCGCCGAA AGTTCATTCT GAGGTCATCT TGATTGAACC TCTTGCACCT
GAACAGCGCC TTGAACCACT GCTCGCCAAA CGTGTTGAGT CTTTGCTGCG TCAGGCTTTT
TTGGCCAGGC GCAAGATGCT GCGCAACACT CTTGCCAAGG TTCTTCCTGC TGCTGAACTG
AATGCTCTTG CTGATGATCT TGGCATCAGC CTTCAGCAAC GCCCCCAAGA ACTGTCCCCT
GCCACTTGGG TGGAATTGGC CAGGGGTTTG AATCGGGCGG ATCTAGTAGA CCCTGAGCCA
TGA
 
Protein sequence
MAFSGHHARK RFAQHWLIDA AVLTQILDAA DVQPDDRLLE VGPGRGALTE RLLASSASAV 
HAVELDRDLV SGLRQRFADQ ARFSLQEGDV LSVPLTLADG RAANKVVANI PYNITGPLLE
RLLGRLDRPV DHPYQRLVLL LQKEVAQRIR ALPGQSCFSA LSVRLQLLAH CTTVCPVPPR
SFKPPPKVHS EVILIEPLAP EQRLEPLLAK RVESLLRQAF LARRKMLRNT LAKVLPAAEL
NALADDLGIS LQQRPQELSP ATWVELARGL NRADLVDPEP