Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_15441 |
Symbol | salY |
ID | 4776166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 1346140 |
End bp | 1347369 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640087053 |
Product | putative ABC transporter |
Protein accession | YP_001017553 |
Protein GI | 124023246 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.422429 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCT CCCTTCCGCT CATCGAAACG GTGAGCATGG CGTTCTCAAC CCTTAAAGCC AATCGCCTAC GTAGTCTCCT GACAATGCTC GGCATTGTGA TCGGCAATGC TTCTGTCATC ACCCTGGTAG GTGTTGGCAG GGGAGCTCAG AATCTGGCTG AGTCTCAACT AAGCAACCTG GGCGCCAATG TGTTGTTTGT GGTGCCTGGC AACAACGACA CTCGTCGTCG CGGTGTGGCA TTTCCGCGAA ATCTCGTGAT CGAAGATTCA GATGCAATCG CTGAGCAAGT TCCAAGCGTG AAAGAAGTTG CACCGCAGAT CAGCTCAAGC GAGGTGATTC AAGCGGGTGC CCAAAGTGCT ACGAGTTCAA TCTCTGGGGT GACCCCAGCG TTTCTACCAG TGCGCAACTT CGAAGTAGCT CGTGGAAGAT TTATTAGTGA TCTTGATCTT CGTAGCGCTC GCAAAGTGGT TGTGATTGGT CCCGACCTTG TCAACAAACT CTTTCCAACG AGTGCGGCAG TCGGTAAGAC ACTACGAATT AAGGATCAAT CCTTTGAAGT GATCGGTGTA ATGGCTCCTA AAGGCGCGGT GTTTGGAAAC AATCAAGATG AAAACGCTTA CATTCCGCTC ACAACAATGG TGAGCCGGCT CACGGGCAGA GATCCAACCT ATGGCGTCAG CCTTAGTTTT ATCAGTGTGG AAGCCAAGAA TGAAGAAAGC ACGGGGGCTG CAAAATTCCA GATCACCAAC TTGCTCCGTC AACGACATCG AATCCTGCGA GATGACGACT TTGCAGTTCG ATCACAGAAA GATGCCCTCA GCATCGTCAA CACAATCACC GGAGGACTAA CCCTCATGTT GGCAGCAATC GGTGGGATAT CGCTGCTAGT AGGAGGAATC GGAATCATGA ATATCATGCT GGTTGCGGTC AGTGAACGCA CTGAGGAAAT CGGACTAAGG AAGGCCCTAG GAGCTCGTAA TAGCGATGTA TTGAGCCAAT TCCTGATCGA ATCACTCGTT CTTGCAAGCT TTGGTGGCGT CATCGGCACA GCTGTAGGTA TTGGCGCCGT CACAACAATC GGAGTTTTGA CCCCTCTCCC GGCATCAATC GGAATAAGCG TCGTTCTAAT CACCGTCACT CTCTCTGGAT CAATTGGTTT GATCTTCGGT GTTTTGCCCG CCAGACGTGC AGCAAGACTT GACCCAATCG TTGCCCTCCG ACGCTTGTAA
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Protein sequence | MNSSLPLIET VSMAFSTLKA NRLRSLLTML GIVIGNASVI TLVGVGRGAQ NLAESQLSNL GANVLFVVPG NNDTRRRGVA FPRNLVIEDS DAIAEQVPSV KEVAPQISSS EVIQAGAQSA TSSISGVTPA FLPVRNFEVA RGRFISDLDL RSARKVVVIG PDLVNKLFPT SAAVGKTLRI KDQSFEVIGV MAPKGAVFGN NQDENAYIPL TTMVSRLTGR DPTYGVSLSF ISVEAKNEES TGAAKFQITN LLRQRHRILR DDDFAVRSQK DALSIVNTIT GGLTLMLAAI GGISLLVGGI GIMNIMLVAV SERTEEIGLR KALGARNSDV LSQFLIESLV LASFGGVIGT AVGIGAVTTI GVLTPLPASI GISVVLITVT LSGSIGLIFG VLPARRAARL DPIVALRRL
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