Gene P9303_15131 details

Gene Information

• Locus tag: P9303_15131
• Symbol: ribB
• ID: 4777032
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 1316191
• End bp: 1318083
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640087021
• Product: bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein
• Protein accession: YP_001017522
• Protein GI: 124023215
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
• TIGRFAM ID: [TIGR00505] GTP cyclohydrolase II; [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.226757
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTCCTCA AGCAATCTGA TGGTTTGAAG ACCGCCGTAG CCCGTAGCGC CGATAACCGC 
TACTCGGCTG CCTCGAACCT GAGAAATGTC AGAGGCTGGA GAGCGATGGG TACTTTCCAT 
TGCCTTCATC GGACGCCGGC TGATCGTACT GGTGTCGATA ATGAACTCAG TACGTTCATC 
CCTAAGGCCC TGAGGACTTC TCCTATACCC GCTGAATCGG TCGAGATCCG CTTCGACGAC 
ATTTCTGACG CACTTGCCGC GATCCGAAAC GGTGAATGCG TTGTGGTTGT TGATGATGAG 
CGCAGAGAAA ACGAGGGCGA CCTGATTTGT GCTGCTCAGT TCGCTACGCC TGAGCAAATC 
AATTTCATGG CCACAGAGGC TCGTGGTCTG ATCTGCCTTG CTATGAAAGG CAGTCGCCTA 
GATCAACTTG ACCTGCCGCT GATGGTTGAT CGCAACACAG ATGCCAACCA AACGGCATTT 
ACCGTAAGCA TCGATGCAGG CCCTGAGAAA GGGGTTTCTA CTGGTATTTC AGCAGAGGAT 
CGAGCGCGCA CGATTCAAGT TGCACTGCAT CCGGAGACTC GTCCAAGAGA CCTGCGCCGC 
CCAGGACATA TTTTCCCCCT TAGAGCGAGT CAAGGAGGTG TTCTCAAAAG GGCTGGACAT 
ACCGAATCCG CCGTGGATTT GTCACAGCTG GCAGGACTTG CTCCAGCTGG CGTGATCTGC 
GAGATCCAAA ACTCAGACGG GTCAATGGCA AGACTGCCGC AATTGCAAAA CTATGCGCGG 
CGCTGGGGAC TCAAGCTCAT CAACATTGCC GATCTCATTC GTTACCGTCT TGAGAACGAA 
CGCTTTGTAT ACCGTCAAGC CACTGCCGAG TTACCAAGTC TCTTTGGCAG TTTTCAGGCT 
ATCGGCTATT TAAATGGTTT GGATGGATCA GAACACATTG CTCTAGTCAA GGGCGATCCA 
CGAGAACTGA AAGAACCAGT TTTAGTGCGC ATGCACTCCG AATGTCTTAC GGGAGATGCT 
TTTGGATCAC TGCGCTGCGA TTGTCGCCCC CAACTTGAAG CAGCGTTGGC TCGCATTGAA 
CAGGAAGGTG AAGGCGTGGT TGTTTATCTT CGCCAGGAAG GTCGCGGCAT TGGTCTAATT 
AACAAATTAA AGGCCTATAG CCTTCAGGAT GGCGGTCTAG ACACTGTTGA AGCCAATGAA 
AGTTTGGGTT TCCCTGCAGA TCTGCGTAAC TACGGGGTTG GTGCTCAAAT TCTCACTGAC 
CTTGGCATTC ACCGTTTACG CCTACTTACA AACAACCCAC GCAAAATTGC TGGACTGGGT 
GGATATGGCT TACAAGTCGA AAGTCGTGTA CCCCTGGTGA TCTGTCCTGG AGATCACAAC 
GCCGCTTATT TAGCTGTAAA GCGGGAAAAA CTTGGACACT TGATGGATAC TGGCAAATCA 
GAGAATCAAG CTCCAGAAGT TGGACCTTTT GTTGTAGTTG CCTGGGACGG TGAGGTGAAT 
GGAGAGACGC TGGCTAAGCT GAGGACTCGT GCAAATGATT GGGCCACAAG CAATGAACTT 
GAGCTCATAG CAGAAAGCTC ACCCCGTTTA CTTGCCCTAT GGGATCGCCC CCTCTTTGTA 
TGGCGTGTAT GTCCACGAGT CAAAACCTCT TCTGAGGTTT CATCAGATCC ACTTAAAAAA 
GCATCGCTGG AGTTACTGCT TCAAGAATTG ATTCAATGGT CAGGGAGCCG TCGGATTGGC 
CTTCTGCGTA CTGACCGCGC TGAGCAAGCA ATGCATCCTC CTCAGGATCT AAAGAGAGAA 
GAGCGGTCGT TGGCATCACT ATTTAAAGAT GATTTTTCCC CACTAAAAGA TTGGGATGCC 
TGGAGCCTTC CCAATCTGAT CCTTTGGTCG TGA 

 

Protein sequence

MVLKQSDGLK TAVARSADNR YSAASNLRNV RGWRAMGTFH CLHRTPADRT GVDNELSTFI 
PKALRTSPIP AESVEIRFDD ISDALAAIRN GECVVVVDDE RRENEGDLIC AAQFATPEQI 
NFMATEARGL ICLAMKGSRL DQLDLPLMVD RNTDANQTAF TVSIDAGPEK GVSTGISAED 
RARTIQVALH PETRPRDLRR PGHIFPLRAS QGGVLKRAGH TESAVDLSQL AGLAPAGVIC 
EIQNSDGSMA RLPQLQNYAR RWGLKLINIA DLIRYRLENE RFVYRQATAE LPSLFGSFQA 
IGYLNGLDGS EHIALVKGDP RELKEPVLVR MHSECLTGDA FGSLRCDCRP QLEAALARIE 
QEGEGVVVYL RQEGRGIGLI NKLKAYSLQD GGLDTVEANE SLGFPADLRN YGVGAQILTD 
LGIHRLRLLT NNPRKIAGLG GYGLQVESRV PLVICPGDHN AAYLAVKREK LGHLMDTGKS 
ENQAPEVGPF VVVAWDGEVN GETLAKLRTR ANDWATSNEL ELIAESSPRL LALWDRPLFV 
WRVCPRVKTS SEVSSDPLKK ASLELLLQEL IQWSGSRRIG LLRTDRAEQA MHPPQDLKRE 
ERSLASLFKD DFSPLKDWDA WSLPNLILWS