| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_15101 |
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| Symbol | |
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| ID | 4778518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 1312552 |
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| End bp | 1314249 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640087018 |
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| Product | PDZ domain-containing protein |
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| Protein accession | YP_001017519 |
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| Protein GI | 124023212 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.185527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGAGG TTGTTGACGT CCACCTTGAT CTGTGTGACA AGGCAAGTCA GACCTTTAAG
GTCAGTCTGA AATGGAAACC AAGAACACAT CGTCAGAGCT GGTCTCTACC GATATGGACC
CCTGGCTCAT ACACCATTAG AGACCATGTT CAGCATCTCC ACAGTCTGAG CCTTTCTCAA
GCCTCAAATG ATTGTCAAGT GCAACGGATC GGCCCAAGTG GTTGGAAGGC TGATCTCGAC
ACTCTTGATC TTGTCACCCT TTGCTATGTC ATTGAGGCTC GACAGCTCAC TGTGCGCACC
TGCTACTTAG ATCCGGAGTT TGCATCCCTT TGTCTTGCGG CTGCTGTGAT GGAAATCGAT
GGTCAGCGTT GGACTCCTCA TTGCCTCACC CTGGACCTAC CAGTGGGTTG GAATGCCTAC
GTTCCTCTGG CTGGAGAGGA AACACTCTGG GCTAAGGATT TTGATCATCT TGTCGATGCT
CCTGTTCATG CTGGATGTTT CGTTTCTCAG CCCTTTGTTG TCAAAAAAAA TTCTCATCAA
CTTCTCTGTA TAGGCGATCC TCCTATGGGA TGGCCGGCAA ACCTTGTAAA TGATGTGAGC
GCTGTTTGTA AAGCTACTTG TTGTCTAATG GATGAACATC CACCAGCCGG AGATCTCTAC
CAATTAGTGA TTCATATGTT AGAAACTGGT TATGGCGGTC TTGAGCATGA TTATGGCGCA
GTTTTGCATT ATTCCTGGCG TGCATTAACT GAACCTGATG GCTATCGGAA GCTTCTACAA
TTAATAGGGC ATGAGTATTT GCATCAATGG AATGTGAGAC GTCTTCGACC CAGGGAATAT
CGACCTTATG ATTATTCTCA AGCTGTGATA AGTGATGGAC TTTGGTTTGC CGAAGGAATC
ACTAGCTACC TGGACCTCAC CCTACCATTC CTTGCTGGGC TGAGCGATCG CTCAACATTA
CTAAAAGATT TATCTCTAGA GTTTTCACCT CTATTAATCA ACCCAGGTCG ACAATTACAG
AGCCTGGCTG ACAGTTCACG TGAAGCCTGG GTGAAATTAT ATAAAGCAAC ACCGGCCAGT
GCCGATTCAC AGGTCAGCTA CTACAAGCTT GGTGCTGCGA TGGCCTTTTG CCTGGATGTT
CGCCTACGTC AACAAAACTC GTCATTAACG CAAGTACTCC GTGACCTTTG GCGGAAGTTT
GGTCGTAGTC ATCGAGGCTA TTCAAGGTTA GACATCAAAG CTGCCATCGC CAAGTTCGAT
CCCAATACTG CGAATGAGGT TGATGCATGG CTTGATCAAC CTGACTCTCT CCCGTTGACT
TCGATAGTTA AAGATCTTGG ACTAAGGTTT GAAGAGAGAT ATTCAAACAA AAGAGAAACA
GGGCTTACCT TAGTTGAACG AGAGGGTCTT GTTTTGGTGT CACGAGTTTC TCCATCTAGT
CCCGCCCATA ATGCAGGTCT TGTCGTTGGG GATGAATTGC TTGCTGTCGG CGGATTTCGA
TTGCGTAAGG TCGATGATTT ATGCAAACTT ATCTCAAATG AAGAGCCTGT ATCGATAATC
TATTCAAGAC GAGGACGGCT TAGTGAAACT GAACTTTCGA GTGGTTTGCC CCAAGTTGAT
CACTGGGAGA TTATTATTGA TTCTGAGGCA CCATCTGAGT TAAGCAATCT ACGGGATCAA
TGGTTTCAGA TTATTTAA
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| Protein sequence | MVEVVDVHLD LCDKASQTFK VSLKWKPRTH RQSWSLPIWT PGSYTIRDHV QHLHSLSLSQ
ASNDCQVQRI GPSGWKADLD TLDLVTLCYV IEARQLTVRT CYLDPEFASL CLAAAVMEID
GQRWTPHCLT LDLPVGWNAY VPLAGEETLW AKDFDHLVDA PVHAGCFVSQ PFVVKKNSHQ
LLCIGDPPMG WPANLVNDVS AVCKATCCLM DEHPPAGDLY QLVIHMLETG YGGLEHDYGA
VLHYSWRALT EPDGYRKLLQ LIGHEYLHQW NVRRLRPREY RPYDYSQAVI SDGLWFAEGI
TSYLDLTLPF LAGLSDRSTL LKDLSLEFSP LLINPGRQLQ SLADSSREAW VKLYKATPAS
ADSQVSYYKL GAAMAFCLDV RLRQQNSSLT QVLRDLWRKF GRSHRGYSRL DIKAAIAKFD
PNTANEVDAW LDQPDSLPLT SIVKDLGLRF EERYSNKRET GLTLVEREGL VLVSRVSPSS
PAHNAGLVVG DELLAVGGFR LRKVDDLCKL ISNEEPVSII YSRRGRLSET ELSSGLPQVD
HWEIIIDSEA PSELSNLRDQ WFQII
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